| United States Patent Application |
20200040047
|
| Kind Code
|
A1
|
|
SOLLNER; Christian
;   et al.
|
February 6, 2020
|
INTERACTION OF DRAXIN AND Y-NETRINS
Abstract
This invention relates to extracellular protein-protein interactions and
their possible therapeutic uses. More particularly, this invention
describes the interaction between Draxin, particularly fragments binding
to .gamma.-Netrins comprising SEQ ID NO.:1, 2 or 3, and variants thereof,
with .gamma.-Netrins, and the use of this interaction to disrupt
.gamma.-Netrin/Netrin receptor interactions. The invention also relates
to diagnostic and/or therapeutic uses of Draxin or fragments or variants
thereof, as well as to an antibody against Draxin inhibiting binding of
Draxin to .gamma.-Netrins. Further, the invention relates to fragments of
.gamma.-Netrins, in particular Draxin-binding Netrin1-fragments
comprising SEQ ID NO.: 51 and variants thereof, as well as to an antibody
against .gamma.-Netrins inhibiting binding of .gamma.-Netrins to Netrin
receptors.
| Inventors: |
SOLLNER; Christian; (Nurtingen, DE)
; GAO; Xuefan; (Tubingen, DE)
; NUSSLEIN-VOLHARD; Christiane; (Tubingen-Bebenhausen, DE)
|
| Applicant: | | Name | City | State | Country | Type | Max-Planck-Gesellschaft zur Foerderung der Wissenschaften e.V. | Muenchen |
| DE | | |
| Assignee: |
Max-Planck-Gesellschaft zur Foerderung der Wissenschaften e.V.
Muenchen
DE
|
| Family ID:
|
49999766
|
| Appl. No.:
|
16/553536
|
| Filed:
|
August 28, 2019 |
Related U.S. Patent Documents
| | | | |
|
| Application Number | Filing Date | Patent Number | |
|---|
| | 15113878 | Jul 25, 2016 | 10435442 | |
| | PCT/EP2015/051088 | Jan 21, 2015 | | |
| | 16553536 | | | |
| | 62049643 | Sep 12, 2014 | | |
|
|
| Current U.S. Class: |
1/1 |
| Current CPC Class: |
C07K 14/475 20130101; C07K 14/4703 20130101; C07K 14/47 20130101; C07K 16/18 20130101; C07K 2319/30 20130101; C07K 14/461 20130101; A61K 38/00 20130101; C07K 2317/76 20130101 |
| International Class: |
C07K 14/47 20060101 C07K014/47; C07K 14/475 20060101 C07K014/475; C07K 16/18 20060101 C07K016/18; C07K 14/46 20060101 C07K014/46 |
Foreign Application Data
| Date | Code | Application Number |
| Jan 23, 2014 | EP | 14152341.5 |
Claims
1-15. (canceled)
16. Draxin-binding peptide comprising (i) at least 20 consecutive amino
acids from the sequence KACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCANGYQQSRSP
IAPCIKIPIAPP (SEQ ID NO.: 51) or (ii) a variant thereof having a sequence
identity of at least 70%, at least 80%, at least 85%, at least 90%, or at
least 95% to SEQ ID NO.: 51; wherein said peptide has a length of up to
580 amino acids and is optionally fused to a heterologous peptide or
polypeptide.
17. The peptide according to claim 16, wherein said peptide comprises a
sequence selected from the group consisting of SEQ ID NO.: 45, SEQ ID
NO.: 48, a peptide corresponding to SEQ ID NO.: 45 or SEQ ID NO.: 48 from
another species, or a variant thereof having a sequence identity of at
least 50%, at least 60%, at least 70%, at least 80%, at least 85%, at
least 90%, or at least 95% thereto.
18. The peptide according to claim 16, which is fused to a heterologous
peptide or polypeptide.
19. The peptide according to claim 16, in combination with a carrier
suitable for use in medicine.
20. The peptide according to claim 16, wherein said variant contains at
least one non-naturally occurring substitution modification relative to
SEQ ID NO.:51.
21. The peptide according to claim 18, wherein said peptide is fused to a
functional fragment of an immunoglobulin (Ig).
22. The peptide according to claim 21, wherein said functional fragment
of an immunoglobulin (Ig) is an Ig Fc fragment.
23. The peptide according to claim 22, wherein said Ig Fc fragment is a
human Ig Fc fragment.
24. The peptide according to claim 23, wherein said human Ig Fc fragment
is a human IgG Fc fragment.
25. A method for treating a condition associated with, accompanied by or
mediated by pathologic, decreased, .gamma.-Netrin expression or activity,
or for treating a condition associated with, accompanied by or mediated
by pathologic, increased, Draxin expression or activity, comprising
administering a draxin-binding peptide comprising (i) at least 20
consecutive amino acids from the sequence KACDCHPVGAAGKTCNQTTGQCPCKD
GVTGITCNRCANGYQQSRSP IAPCIKIPIAPP (SEQ ID NO.: 51) or (ii) a variant
thereof having a sequence identity of at least 70%, at least 80%, at
least 85%, at least 90%, or at least 95% to SEQ ID NO.: 51, which is
optionally fused to a heterologous peptide or polypeptide,
26. The method according to claim 25, wherein said peptide has a length
of up to 500, up to 400, up to 300, up to 250, up to 200, up to 150, up
to 100, up to 75 or up to 60 amino acids.
27. The method according to claim 25, wherein said peptide comprises at
least 20, at least 30, at least 40 or at least 50 consecutive amino acids
from SEQ ID NO.:51 or the complete SEQ ID NO.:51, or a variant thereof
having a sequence identity of at least 70%, at least 80%, at least 85%,
at least 90%, or at least 95% to SEQ ID NO.: 51.
28. The method according to claim 25, wherein said condition is a
cardiovascular disease, which is selected from the group consisting of
ischemia/reperfusion (I/R) injury; myocardial infarction; mitochondrial
damage; neointimal formation and restenosis; vascular injury or vascular
dysfunction; vascular smooth muscle cell migration and proliferation;
apoptosis of endothelial progenitor cells, procure induced restenosis;
and hypertension.
29. The method according to claim 25, wherein said peptide is
administered as an active agent in a pharmaceutical composition together
with at least one pharmaceutically acceptable carrier.
30. The method according to claim 25, further comprising administering at
least one additional therapeutically active agent, wherein the additional
therapeutically active agent is selected from the group consisting of
decoy Netrin receptors, cytostatic agents, cytotoxic agents, statins,
antihyperlipidemic agents, anti-coagulant agents, kinase inhibitors and
angiogenesis modulators.
31. The method according to claim 28, wherein said ischemia/reperfusion
(I/R) injury is selected from the group consisting of renal I/R injury
and I/R injury of cardiac tissue; and said myocardial infarction is an
infarct resulting from I/R injury.
32. An antibody, functional fragment or derivative thereof directed
against Draxin, wherein said antibody, functional fragment or derivative
thereof inhibits binding of Draxin to at least one .gamma.-Netrin,
wherein said antibody or functional fragment or derivative thereof is
directed against an epitope between amino acids 209-284, amino acids
226-257, or amino acids 232-252, of human Draxin.
33. An antibody, functional fragment or derivative thereof directed
against Netrin1, which inhibits binding of at least one .gamma.-Netrin to
at least one Netrin receptor, and which is directed against an epitope
between amino acids 285-451 of human Netrin1 or a corresponding epitope
in another species.
34. The antibody according to claim 32, wherein said corresponding
epitope in another species is an epitope located in the EGF1-3 domains of
a zebrafish .gamma.-Netrin.
35. The antibody or fragment or derivative thereof according to claim 32,
in combination with a pharmaceutically acceptable carrier.
Description
CROSS REFERENCE TO RELATED APPLICATION
[0001] This application is a divisional of U.S. Ser. No. 15/113,878 filed
Jul. 25, 2016, which is a 35 U.S.C. 371 National Phase Entry Application
from PCT/EP2015/051088, filed Jan. 21, 2015, which claims the benefit of
U.S. Patent Application No. 62/049,643 filed on Sep. 12, 2014 and
European Patent Application No. 14152341.5 filed Jan. 23, 2014, the
disclosure of which are incorporated by reference in their entirety.
FIELD OF THE INVENTION
[0002] This invention relates to extracellular protein-protein
interactions and their possible therapeutic uses. More particularly, this
invention describes the interaction between Draxin, particularly
fragments binding to .gamma.-Netrins comprising SEQ ID NO.:1, 2 or 3, and
variants thereof, with .gamma.-Netrins, and the use of this interaction
to disrupt .gamma.-Netrin/Netrin receptor interactions. The invention
also relates to diagnostic and/or therapeutic uses of Draxin or fragments
or variants thereof, as well as to an antibody against Draxin inhibiting
binding of Draxin to .gamma.-Netrins. Further, the invention relates to
fragments of .gamma.-Netrins, in particular Draxin-binding
Netrin1-fragments comprising SEQ ID NO.: 51 and variants thereof, as well
as to an antibody against .gamma.-Netrins inhibiting binding of
.gamma.-Netrins to Netrin receptors.
SEQUENCE LISTING
[0003] The instant application contains a Sequence Listing which has been
submitted in ASCII format via EFS-Web and is hereby incorporated by
reference in its entirety. Said ASCII copy, created on Jan. 16, 2018,
filed in the parent application Ser. No. 15/113,878 is named 57261
PUSWO_ST25.txt and is 87,752 bytes in size.
BACKGROUND OF THE INVENTION
[0004] The laminin-related netrin protein family in humans comprises 5
members. Three of them, Netrin1, Netrin3, and Netrin4 are secreted
proteins. NetrinG1 and NetrinG2 instead are linked to the cell surface by
a GPI anchor. The LamNT domain and the EGF domains of Netrin1 and Netrin3
are derived from the .gamma. chain of Laminin1. In the context of the
present invention, these Netrins are thus referred to as
".gamma.-Netrins". In contrast, the corresponding domains of Netrin4,
NetrinG1 and NetrinG2 are homologous to the domains present in the .beta.
chain of Laminin1 (Moore et al., 2007).
[0005] Netrin1 is a diffusible, laminin-related protein identified as
neuronal guidance cue during development of the nervous system. Netrin1
mediates its biological effects through binding to receptors, which
belong to the so-called dependence receptors, e.g. deleted in colorectal
cancer (DCC) and uncoordinated-5-homolog (UNCSH). Recently, it has been
found that Netrin1 is expressed outside the nervous system and
contributes to the patterning of developing epithelial tissues such as
mammary gland, pancreas, and lung by regulating diverse processes
including adhesion, motility, proliferation, and differentiation of
cells.
[0006] Numerous tumors have been described to express cell surface
receptors belonging to the DCC- and UNC5-family. These receptors are
binding to the secreted ligand Netrin1 in the extracellular space and
serve, in addition to their well-established neurodevelopmental function,
as dependence receptors in cancers (Castets et al., 2012; Mehlen et al.,
2011). In tumors they can regulate tumor cell survival in a Netrin1
dependent manner. Netrin1 itself is known to be upregulated by many tumor
types and has been suggested to act as an oncogene (Arakawa, 2004;
Fitamant et al., 2008). If Netrin1 is not bound to dependence receptors
of the DCC- and UNC5-family, the receptors cannot form dimers or
multimers, which in turn triggers the activation of a pro-apoptotic
pathway.
[0007] In several studies, decoy Netrin receptor fragments have been used
to disrupt Netrin/Netrin receptor interactions in order to induce
pro-apoptotic signaling. For example, such receptor fragments have been
used in cancer cell lines (Delloye-Bourgeois et al., 2009; Fitamant et
al., 2008) and in animal models (Fitamant et al., 2008; Paradisi et al.,
2013; Paradisi et al., 2009) to induce cancer cell death. However, using
a fragment of a Netrin receptor causes interference at a relatively late
stage of the signaling cascade, namely just before dimerization of the
receptor. Moreover, even when using high concentrations of these decoy
receptors, a residual binding of Netrin to the full length receptor
cannot be prevented.
[0008] It was thus an object of the invention to provide compounds that
can be used for interfering with the binding of .gamma.-Netrins, in
particular Netrin1 to at least one of its receptors, which at least
partially overcome the disadvantages of the prior art.
[0009] Draxin is a secreted protein described to be involved in axon
guidance decisions (Islam et al., 2009). In contrast to Netrins 1-3,
which are present in vertebrates and invertebrates, Draxin can only be
found in vertebrate genomes. The amino acid sequence of human Draxin is
shown as SEQ ID NO.: 4. In zebrafish, there exist two Draxin isoforms
(DraxinA and DraxinB); their amino acid sequences are represented by SEQ
ID NO.: 5 and SEQ ID NO.: 6.
[0010] By using an extracellular protein-protein interaction screen assay
(AVEXIS), the present inventors identified Draxin as a novel direct
binding partner for Netrin1. Furthermore, by using an AVEXIS based
competition assay, the inventors were able to show that Draxin or Draxin
protein fragments can compete with Netrin receptors for binding to
Netrin1.
[0011] The present invention therefore provides specific peptides binding
to .gamma.-Netrins (".gamma.-Netrin-binding peptides"), particularly to
Netrin1, as well as antibodies directed against .gamma.-Netrins
(".gamma.-Netrin-binding antibodies"), particularly against Netrin1,
which may be used for interfering with .gamma.-Netrin/Netrin receptor
binding, in particular Netrin1/Netrin receptor binding. The invention
further provides Draxin-binding peptides as well as Draxin-binding
antibodies inhibiting binding of Draxin to .gamma.-Netrins, in particular
to Netrin1.
DETAILED DESCRIPTION OF THE INVENTION
[0012] In one aspect, the present invention relates to peptides which bind
to at least one .gamma.-Netrin, with a high specificity and a high
affinity. Importantly, the affinity of Draxin to the .gamma.-Netrins, in
particular to Netrin1, is significantly higher than the affinity of
.gamma.-Netrins, in particular of Netrin1 to Netrin receptors.
[0013] Accordingly, the invention provides a .gamma.-Netrin-binding
peptide, comprising (i) the sequence EVMPTLDMALFDWTDYEDLKP (SEQ ID NO.:
1), or (ii) the sequence DVAPTFNMALFDWTDYEDMRP (SEQ ID NO.: 2), or (iii)
the sequence EVMPTLDMTLFDWTDYEDMKP (SEQ ID NO.: 3), or (iv) a variant
thereof having a sequence identity of at least 70%, at least 80%, at
least 85%, at least 90%, or at least 95% to SEQ ID NO.: 1, 2 and/or 3,
wherein said peptide has a length of up to 328 amino acids and is
optionally fused to a heterologous peptide or polypeptide. Preferably,
the .gamma.-Netrin is Netrin1.
[0014] The .gamma.-Netrin-binding peptide is characterized in that it
binds with high affinity to Netrins derived from the .gamma. chain of
Laminin1, comprising in particular human Netrin1 and human Netrin3 as
well as Netrins 1a, 1b and 2 from zebrafish (Danio rerio). In particular,
the .gamma.-Netrin-binding peptide of the invention binds to human
Netrin1 and to zebrafish Netrin1a (also referred to as Ntn1a) and
Netrin1b (also referred to as Ntn1b). In preferred embodiments, it is
therefore referred to as "Netrin1-binding peptide".
[0015] In some embodiments, the peptide with a length of up to 328 amino
acids comprises any one of SEQ ID NO.: 1, 2, 3 or a variant thereof
having a sequence identity of at least 70%, at least 80%, at least 85%,
at least 90%, or at least 95% to SEQ ID NO.: 1, 2 and/or 3 and is free of
any further heterologous peptides.
[0016] In other embodiments, the peptide with a length of up to 328 amino
acids comprises any one of SEQ ID NO.: 1, 2, 3 or a variant thereof
having a sequence identity of at least 70%, at least 80%, at least 85%,
at least 90%, or at least 95% to SEQ ID NO.: 1, 2 and/or 3 and is fused
to a heterologous peptide or polypeptide as defined below.
[0017] The minimal sequence of the .gamma.-Netrin-binding peptide, in
particular Netrin1-binding peptide is represented by
TABLE-US-00001
SEQ ID NO.: 1
EVMPTLDMALFDWTDYEDLKP,
SEQ ID NO.: 2
DVAPTFNMALFDWTDYEDMRP,
and
SEQ ID NO.: 3
EVMPTLDMTLFDWTDYEDMKP, respectively.
[0018] In some embodiments, the peptide has a length of up to 328 amino
acids, up to 324 amino acids, up to 320 amino acids, up to 250 amino
acids, up to 200 amino acids, up to 100 amino acids, up to 50 amino
acids, or up to 30 amino acids. According to other embodiments, the
peptide has a length of up to 150 amino acids or up to 125 amino acids.
Fragments comprising up to 50 amino acids are preferred according to some
embodiments.
[0019] In certain preferred embodiments, a variant of SEQ ID NO.: 1, SEQ
ID NO.: 2 or SEQ ID NO.: 3 have a sequence identity of at least 70% to
SEQ ID NO.: 1, 2 and/or 3. In further embodiments the level of sequence
identity may be at least 90%, or even at least 95% to SEQ ID NO.: 1, 2
and/or 3.
[0020] A "variant" in the context of the present invention is any peptide
whose amino acid sequence varies in at least one position from the
respective reference peptide, but retains the biological activity of the
reference peptide; for example, a variant of SEQ ID NO.: 1 differs in at
least one amino acid therefrom, and retains the .gamma.-Netrin-,
particularly Netrin1-binding activity. In particular, variants of SEQ ID
NO.: 1, 2 and 3 differ in 1, 2, 3, 4, 5, 6 or 7 amino acids from SEQ ID
NO.: 1, SEQ ID NO.: 2 and/or SEQ ID NO.: 3, provided they retain the
.gamma.-Netrin-, particularly Netrin1-binding activity. Variations will
usually be generated by amino acid substitutions. Particularly, a variant
according to the invention will be characterized in that it has been
changed to contain at least one non-naturally occurring substitution
modification relative to the respective reference peptide.
[0021] The peptidic compounds of the present invention comprise a linear
backbone of amino carboxylic acids linked by peptide, i.e. carboxamide
bonds. Preferably, the amino carboxylic acids are .alpha.-amino
carboxylic acids and more preferably L-.alpha.-amino carboxylic acids,
unless indicated otherwise. Any amino acid of the sequences disclosed
herein may be replaced either by an unmodified canonical proteinogenic
L-amino acid, or by an unmodified canonical proteinogenic D-amino acid.
Also envisaged are substitutions with non-canonical proteinogenic amino
acids, in particular with ornithine, 2,4-diamino butyric acid,
2,3-diamino propionic acid, selenocysteine, pyrrolysine, hydroxyproline,
O-phosphoserine, O-phosphotyrosin, .gamma.-carboxyglutamic acid,
.gamma.-aminobutyric acid, norleucine, .epsilon.-aminohexanoic acid, and
with other posttranslationally modified amino acids, e.g. amino acids
with amidated carboxyl groups (at C-termini of peptides), amino acids
with alkylated (e.g. methylated) side chains, amino acids with an amino
side chain group (such as lysine and ornithine) with modifications at one
or both of the hydrogen atoms of the amino side chain group, for example
with a lipophilic moiety attached via a carboxamide bond, etc.
[0022] The percent sequence identity may be determined according to the
following formula:
I=n:L
wherein I is the identity in percent, n is the number of identical amino
acids between a given sequence and a comparative sequence as shown e.g.
in SEQ ID NOs.: 1, 2 and 3, and L is the length of the comparative
sequence. Importantly, when calculating the percent sequence identity
according to this formula, an alignment of the two sequences shall be
carried out without gaps between complementary portions and over the
whole length of the comparative sequence.
[0023] In specific embodiments, the invention provides a
.gamma.-Netrin-binding peptide, comprising (i) the sequence
EVMPTLDMALFDWTDYEDLKP (SEQ ID NO.: 1), or (ii) the sequence
DVAPTFNMALFDWTDYEDMRP (SEQ ID NO.: 2), or (iii) the sequence
EVMPTLDMTLFDWTDYEDMKP (SEQ ID NO.: 3), or (iv) a variant thereof having a
sequence identity of at least 70%, at least 80%, at least 85%, at least
90%, or at least 95% to SEQ ID NO.: 1, 2 and/or 3, wherein said peptide
has a length of up to 100 amino acids and is optionally fused to a
heterologous peptide or polypeptide.
[0024] According to some embodiments, the .gamma.-Netrin-binding peptide,
in particular the Netrin1-binding peptide, comprises any one of SEQ ID
NO.: 7, SEQ ID NO.: 8, SEQ ID NO.: 9, SEQ ID NO.: 10, SEQ ID NO.: 11, SEQ
ID NO.: 12, SEQ ID NO.: 13, SEQ ID NO.: 14 or SEQ ID NO.: 15 or a
corresponding fragment of another species. Preferably, the peptide
comprises any one of SEQ ID NO.: 10, SEQ ID NO.: 11, SEQ ID NO.: 12, SEQ
ID NO.: 13, SEQ ID NO.: 14, and SEQ ID NO.: 15 or a corresponding
fragment of another species, more preferably SEQ ID NO.: 15 or a
corresponding fragment of another species.
[0025] In some preferred embodiments, the .gamma.-Netrin-binding peptide,
in particular the Netrin1-binding peptide, comprises a sequence which has
a length of 22 amino acids. This 22-amino-acid (22aa) sequence may for
example be SEQ ID NO.:16, or it may be SEQ ID NO.: 14, or it may be SEQ
ID NO.: 17, or it may be a variant of any of these sequences, e.g. a
corresponding fragment from another species with an additional amino acid
residue, preferably glycine (Gly) at the N-terminus. Variants of SEQ ID
NO.: 16, 14, 17 have a sequence identity of at least 70% to SEQ ID NO.:
16, 14 and/or 17. In further embodiments, the level of sequence identity
may be at least 90%, or even at least 95% to SEQ ID NO.: 16, 14 and/or
17. In particular, a variant of SEQ ID NO.: 16, 14, 17 may differ in 1,
2, 3, 4, 5, 6 or 7 amino acids from SEQ ID NO.: 16, SEQ ID NO.: 14 and/or
SEQ ID NO.: 17, provided they retain the .gamma.-Netrin-binding activity.
[0026] Also encompassed by the invention is any variant of any one of SEQ
ID NOs.: 7-15 or a corresponding fragment of another species having a
sequence identity of at least 50%, at least 60%, at least 70%, at least
80%, at least 85%, at least 90%, or at least 95% thereto, as long as the
binding activity to .gamma.-Netrins, preferably to Netrin1, is
maintained. In some preferred embodiments, the level of sequence identity
is at least 70%. In further preferred embodiments, the level of sequence
identity is at least 90%.
[0027] In some embodiments, the .gamma.-Netrin-binding peptide, in
particular the Netrin1-binding peptide, according to the invention is
fused to a heterologous peptide or polypeptide. A "heterologous peptide
or polypeptide" in the context of the invention is any peptide with a
length of at least 4 amino acids, which originates from another species
as compared to the .gamma.-Netrin-binding peptide or which is an
artificial, i.e. non-naturally occurring peptide or polypeptide. Examples
of such heterologous (poly)peptides are protein tags, in particular
epitope tags such as the Myc-tag and the HA-tag, affinity tags such as
FLAG, poly(His), chitin binding protein (CBP), maltose binding protein
(MBP) and glutathione-S-transferase (GST), enzymes such as alkaline
phosphatase, luciferase, horseradish peroxidase and .beta.-galactosidase,
or fluorescent proteins such as GFP, RFP and the like. Other examples are
sequences that direct peptides attached thereto to specific locations
inside cells or to the extracellular space (signal sequences); specific
examples of such sequences are represented by SEQ ID NOs.: 70 and 71.
[0028] Further preferred examples of heterologous (poly)peptides are
immunoglobulins (Ig) or functional fragments of immunoglobulins, such as
Fv, scFv, Fab, Fab', F(ab')2, Fc, diabodies, minibodies, domain
antibodies (dAb), camelid antibodies, nanobodies (VHH), disulfide
stabilized Fv fragments (dsFv) and CDR-comprising peptides. The
immunoglobulins or fragments thereof may be of any isotype, e.g. of the
IgA-, IgD-, IgE, IgG or IgM-type. A functional structure analogous to the
isotype G of immunoglobulins (IgG) is preferred. Among these,
immunoglobulins or fragments thereof of the IgG1-, IgG2-, IgG3-, or
IgG4-type are preferred.
[0029] In particularly preferred embodiments, the heterologous peptide or
polypeptide is an Ig Fc fragment, for example an Fc fragment from mouse,
rat, chicken, rabbit or human, with human Ig Fc fragments being
preferred. Still more preferably, the human Ig Fc fragment is a human IgG
Fc fragment, e.g. a human IgG1, IgG2, IgG3, or IgG4 Fc fragment.
[0030] The heterologous (poly)peptide may be conjugated to the
.gamma.-Netrin-binding peptide directly or via a spacer of suitable
length. Suitable spacers are e.g. heterologous peptide linkers having a
length of from 10 to 50, preferably from 10 to 30 amino acid residues. It
is further preferred for the peptide linkers to be flexible linkers
without a secondary structure. For example, suitable peptide linkers
consist of at least 80% or at least 90%, preferably at least 95% or
completely of glycine and/or serine residues. Particularly suitable are
peptide linkers which contain a plurality of sequences SGGGG (SEQ ID NO
82).
[0031] In some preferred embodiments of the invention, the inventive
.gamma.-Netrin-binding peptides, particularly the Netrin1-binding
peptides, are competitive with Netrin receptors and can even release a
.gamma.-Netrin, e.g. human Netrin1 or zebrafish Netrin1a or 1 b, bound to
a Netrin receptor.
[0032] In a further aspect, the invention relates to a
.gamma.-Netrin-binding peptide as defined herein for use in medicine. A
"use in medicine" in the context of the invention may be a use in therapy
and/or a use in diagnostics. Preferably, the .gamma.-Netrin-binding
peptide, in particular the Netrin1-binding peptide, according to the
invention is for use in human medicine, but it may also be used for
veterinary purposes.
[0033] In particular, a .gamma.-Netrin-binding peptide comprising (i) the
sequence EVMPTLDMALFDWTDYEDLKP (SEQ ID NO.:1), or (ii) the sequence
DVAPTFNMALFDWTDYEDMRP (SEQ ID NO.:2), or (iii) the sequence
EVMPTLDMTLFDWTDYEDMKP (SEQ ID NO.:3), or (iv) a variant thereof having a
sequence identity of at least 70%, at least 80%, at least 85%, at least
90%, or at least 95% to SEQ ID NO.:1, 2 and/or 3, which is optionally
fused to a heterologous peptide or polypeptide, is for use in the
prevention or treatment of a condition associated with, accompanied by or
mediated by pathologic, particularly increased, .gamma.-Netrin expression
or activity. Preferably, the .gamma.-Netrin is Netrin1.
[0034] A "pathologic expression or activity" of .gamma.-Netrin, in
particular Netrin1, as referred to herein is generally meant to encompass
all situations, in which the ratio of expression and/or activity between
Draxin and .gamma.-Netrin and/or between .gamma.-Netrin and at least one
Netrin receptor is abnormal.
[0035] In particular, a "pathologic expression" means any level of
expression, either on the DNA or the protein level, that differs from
that of a normal healthy subject. Preferably, a pathologic .gamma.-Netrin
expression may be or may lead to a decreased .gamma.-Netrin protein level
or, more preferably, an increased .gamma.-Netrin protein level,
particularly an increased Netrin1 protein level, in a given
(extracellular) environment of an organism. In accordance with preferred
embodiments of the invention, the presence of an increased .gamma.-Netrin
level, particularly protein level, more particularly Netrin1 protein
level, is defined as lying between 1 and 2 standard deviations above the
average of healthy adults. Similarly, the presence of a decreased
.gamma.-Netrin protein level is defined as lying between 1 and 2 standard
deviations below the average of healthy adults. For example, the
.gamma.-Netrin level in patient samples may be increased or decreased by
a factor of at least 1,3 as compared to control samples from healthy
adults.
[0036] A "pathologic activity" as referred to herein means in particular
any activity of a protein that is abnormal. Preferably, a pathologic
.gamma.-Netrin activity may be a decreased or increased activity, e.g.
binding to Netrin receptors with a lower or higher affinity. In
accordance with preferred embodiments of the invention, the presence of
an increased .gamma.-Netrin activity, particularly Netrin1 activity, is
defined as lying between 1 and 2 standard deviations above the average of
healthy adults. Similarly, the presence of a decreased .gamma.-Netrin
activity is defined as lying between 1 and 2 standard deviations below
the average of healthy adults. For example, the .gamma.-Netrin activity
in patient samples may be increased or decreased by a factor of at least
1,3 as compared to control samples from healthy adults.
[0037] A control group of "healthy adults" according to the invention can
be determined by the skilled person with routine experimentation. For
example, "healthy adults" for use as a possible control group herein may
be healthy persons between 25 and 65 years of age, having a body mass
index of 20-25, which may be sex-matched, if applicable.
[0038] The .gamma.-Netrin-binding peptide for use as defined above may
e.g. be a full-length Draxin from any vertebrate species, in particular
human Draxin, rat Draxin, mouse Draxin, zebrafish Draxin A or zebrafish
Draxin B. It may also be a variant of a full-length Draxin protein,
characterized in that the variant differs in at least one, at least five,
at least ten, at least 20 or even more amino acids from the complete
sequence of the respective full-length Draxin protein, provided it
retains the .gamma.-Netrin-, in particular the Netrin1-binding activity.
In preferred embodiments, the peptide is however significantly shorter as
compared to full-length Draxin. For example, the peptide may have a
length of up to 328, up to 324, up to 320, up to 300, up to 250, up to
200, up to 150, up to 100, up to 75 or up to 50 amino acids. In some
preferred embodiments, the peptide has a length of up to 50 amino acids,
e.g. 21 amino acids or 22 amino acids and is derived from zebrafish
DraxinA. The peptide may or may not be fused to a heterologous peptide or
polypeptide. Suitable peptides or polypeptides for fusion with the
.gamma.-Netrin-binding peptide are those described herein above,
preferably protein tags, immunoglobulins (Ig) or functional fragments of
immunoglobulins, wherein Ig Fc fragments, particularly human Ig Fc
fragments are preferred. Still more preferably, the human Ig Fc fragment
is a human IgG Fc fragment, e.g. a human IgG1, IgG2, IgG3, or IgG4 Fc
fragment.
[0039] In some embodiments of the invention, the condition associated
with, accompanied by or mediated by pathologic, particularly increased,
.gamma.-Netrin, preferably Netrin1 expression or activity is a
hyperproliferative disease. A hyperproliferative disease according to the
invention may be a tumor disease, a premalignant, non-neoplastic or
non-malignant hyperproliferative disorder. In particular, the condition
is a tumor disease.
[0040] An exemplary hyperproliferative disease which may be prevented or
treated using the .gamma.-Netrin-binding peptides, particularly
Netrin1-binding peptides according to the invention is neoplastic lesions
found in human inflammatory bowel disease (IBD).
[0041] Exemplary tumor diseases, which may be prevented or treated using
the .gamma.-Netrin-binding peptides, particularly Netrin1-binding
peptides according to the invention, are selected from the group
consisting of breast cancer, renal cancer, liver cancer, prostate cancer,
colorectal cancer, lung cancer, neuroblastoma, meningioma of the brain,
pituitary adenoma, glioma, glioblastoma, acute myeloid leukemia, sarcoma,
melanoma, ovarian adenocarcinoma, renal adenocarcinoma, uterus
adenocarcinoma, stomac adenocarcinoma, kidney adenocarcinoma and rectal
adenocarcinoma, pancreatic cancer, inflammation driven cancers,
particularly colorectal cancer, colorectal cancer associated with IBD,
colorectal cancer associated with ulcerative colitis, colorectal cancer
associated with Crohn's disease, and tumors derived from inflammatory
bowel disease, including metastatic and particularly aggressive forms of
these tumor diseases.
[0042] According to one embodiment, the tumor disease is neuroblastoma.
[0043] Preferably, the tumor disease is selected from the group consisting
of pancreatic cancer, colorectal cancer, breast cancer, particularly
metastatic breast cancer, and lung cancer, particularly non-small cell
lung cancer.
[0044] In other embodiments of the invention, the condition associated
with, accompanied by or mediated by pathologic .gamma.-Netrin,
particularly Netrin1 expression or activity is a cardiovascular disease,
in particular atherosclerosis.
[0045] In still other embodiments of the invention, the condition
associated with, accompanied by or mediated by pathologic .gamma.-Netrin,
particularly Netrin1 expression or activity is a neurological disorder,
e.g. spinal cord injury.
[0046] The .gamma.-Netrin-binding peptide, particularly Netrin1-binding
peptide for use according to the invention may, according to a further
aspect of the invention, also be present as an active agent in a
pharmaceutical composition together with at least one pharmaceutically
acceptable carrier. The present invention thus relates to a
pharmaceutical composition comprising a .gamma.-Netrin, particularly
Netrin1-binding peptide or a salt or solvate thereof and at least one
pharmaceutically acceptable carrier. Optionally, the pharmaceutical
composition further comprises pharmaceutically acceptable excipients
and/or adjuvants. Concentrations of these carriers, excipients and/or
adjuvants, if used, are in a range that is physiologically acceptable.
[0047] A "carrier" as used herein must be physiologically acceptable and
retain the therapeutic properties of the substance with which it is
administered. Standard acceptable pharmaceutical carriers and their
formulations are known to the skilled person. The carriers used will
differ according to the administration route. Examples are magnesium
carbonate, magnesium stearate, talc, sugar, lactose, pectin, dextrin,
starch, gelatine, tragacanth, methylcellulose, sodium
carboxymethylcellulose, a low melting-point wax, cocoa butter, water,
alcohols, polyols, glycerol, vegetable oils, buffers etc.
[0048] As exemplary excipients, disintegrators, binders, fillers, and
lubricants may be mentioned. Examples of disintegrators include
agar-agar, algins, calcium carbonate, cellulose, colloid silicon dioxide,
gums, magnesium aluminium silicate, methylcellulose, and starch. Examples
of binders include microcrystalline cellulose, hydroxymethyl cellulose,
hydroxypropylcellulose, and polyvinylpyrrolidone. Examples of fillers
include calcium carbonate, calcium phosphate, tribasic calcium sulfate,
calcium carboxymethylcellulose, cellulose, dextrin, dextrose, fructose,
lactitol, lactose, magnesium carbonate, magnesium oxide, maltitol,
maltodextrins, maltose, sorbitol, starch, sucrose, sugar, and xylitol.
Examples of lubricants include agar, ethyl oleate, ethyl laureate,
glycerin, glyceryl palmitostearate, hydrogenated vegetable oil, magnesium
oxide, stearates, mannitol, poloxamer, glycols, sodium benzoate, sodium
lauryl sulfate, sodium stearyl, sorbitol, and talc.
[0049] Usual stabilizers, preservatives, wetting and emulsifying agents,
consistency-improving agents, flavour-improving agents, salts for varying
the osmotic pressure, buffer substances, solubilizers, diluents,
emollients, colorants and masking agents and antioxidants come into
consideration as pharmaceutical adjuvants.
[0050] In yet a further aspect of the invention, the
.gamma.-Netrin-binding peptide, particularly Netrin1-binding peptide for
use according to the invention may be widely combined with other
therapeutically active agents, especially to achieve a synergistic effect
in therapy and/or to be able to reduce the dosage of one or more active
ingredients. Thus, the peptide is, in some embodiments, for use together
with at least one additional therapeutically active agent, wherein the
additional therapeutically active agent is particularly selected from the
group consisting of decoy Netrin receptors, cytostatic agents, cytotoxic
agents, statins, antihyperlipidemic agents, anti-coagulant agents, kinase
inhibitors and angiogenesis modulators. Especially preferred therapeutic
agents for combination with the .gamma.-Netrin-binding peptide are
cytostatic agents and cytotoxic agents.
[0051] A combination of a .gamma.-Netrin-binding peptide, particularly a
Netrin1-binding peptide, with at least one additional therapeutically
active agent can be applied either by separate administration of the
active ingredients to the patient or in the form of combination products
in which a plurality of active ingredients are present in one
pharmaceutical preparation. When the active ingredients are administered
by separate administration of the active ingredients, this can be done
simultaneously or consecutively.
[0052] The peptides according to the invention, either in an isolated form
or as a pharmaceutical composition will typically be administered to a
subject in need thereof, in particular a human subject. They will
typically also be administered in a therapeutically effective amount,
i.e. in an amount sufficient to achieve the desired effect. For example,
one desired effect to be achieved by administration of
.gamma.-Netrin-binding peptides or anti-.gamma.-Netrin antibodies or
fragments or derivatives described herein may be to block, inhibit and/or
neutralize one or more biological function of .gamma.-Netrins, in
particular of Netrin1, such as the binding to one or more Netrin
receptor(s).
[0053] Administration of suitable compositions may be effected in
different ways, e.g., by intravenous, intraperitoneal, subcutaneous,
intramuscular, topical, oral, intradermal, intranasal or intrabronchial
administration. Administration may also be conducted directly at the
target site.
[0054] The necessary amount to be effective depends on a number of
factors, such as the choice of the specific compound, the intended use,
the administration route and the clinical condition of the patient. An
appropriate "effective" amount in any individual case may be determined
by a skilled person in the art, e.g. a skilled physician, using routine
experimentation. An exemplary "therapeutically effective amount" of a
peptide according to the invention may be about 0.01 mg to 50 mg/dose,
preferably 0.1 mg to 10 mg/dose.
[0055] In yet a further aspect, the invention relates to an antibody or
fragment or derivative thereof directed against Draxin, which inhibits
binding of Draxin to .gamma.-Netrins, in particular to Netrin1.
[0056] In yet a further aspect, the invention relates to an antibody or
fragment or derivative thereof directed against Netrin1, which inhibits
binding of at least one .gamma.-Netrin, in particular of Netrin1, to at
least one Netrin receptor, and which is directed against an epitope
between amino acids 285-451 of human Netrin1. In particular, the antibody
inhibits binding of at least one .gamma.-Netrin, preferably Netrin1 to at
least one of DCC (Deleted in colorectal cancer), DSCAM, DSCAM-L1, PTPRF
(protein tyrosine phosphatase, receptor-type F), NEO (Neogenin), ADORA2B
(adenosine A2B), Nope (Neighbor Of Punc E1 1), and members of the UNCSH
family (Uncoordinated-5 homologues; UNC5H1, UNC5H2, UNC5H3, UNC5H4).
[0057] The term "antibody" as used herein particularly refers to molecules
comprising at least one immunoglobulin heavy chain and at least one
immunoglobulin light chain. Each heavy and light chain may comprise a
variable and a constant domain. The antigen-binding site may be formed
from the variable domains of a heavy and a light chain. A variable region
(also referred to as variable domain) comprises complementarity
determining regions (CDRs), e.g. a CDR1, a CDR2 and a CDR3 region, and
framework regions (FRs) flanking the CDRs. The term "complementarity
determining region" is readily understood by the skilled person (see, for
example, Harlow and Lane (eds.), Antibodies: A Laboratory Manual, CSHL
Press, Cold Spring Harbor, N.Y., 1988; incorporated herein by reference
in its entirety) and refers to the stretches of amino acids within the
variable domain of an antibody that primarily make contact with the
antigen and determine antibody specificity. This region is also known as
the hypervariable region.
[0058] The term "(functional) antibody fragment or derivative thereof" as
used herein encompasses fragments of antibodies, especially of human or
humanized antibodies, such as portions of the above-mentioned antibodies
which comprise at least one antigen-binding site. Examples of antibody
fragments according to the invention include Fab fragments, Fab'
fragments, F(ab').sub.2 fragments, Fv fragments, diabodies or single
chain antibody molecules and other fragments as long as they exhibit the
desired capability of binding to their target antigen, e.g. Draxin or at
least one .gamma.-Netrin. As exemplary single chain antibody molecules,
scFv and nanobodies (VHH) are mentioned.
[0059] In case of antibodies or fragments or derivatives thereof directed
against Draxin, only those antibodies, fragments and derivatives which
inhibit the binding of Draxin to at least one .gamma.-Netrin, preferably
to Netrin1 are encompassed by the invention.
[0060] Likewise, in case of antibodies or fragments or derivatives thereof
directed against .gamma.-Netrin(s), only those antibodies, fragments and
derivatives which inhibit the binding of at least one .gamma.-Netrin,
preferably Netrin1, to at least one Netrin receptor are encompassed by
the invention.
[0061] Such inhibition can be determined by the skilled person via routine
experimentation, e.g. via binding assays.
[0062] The term "bind" or "binding" of e.g. an antibody as used herein
means an at least temporary interaction or association with or to e.g. a
target antigen, e.g. Draxin or a .gamma.-Netrin, comprising fragments
thereof containing an epitope.
[0063] In preferred embodiments, the antibody directed against Draxin
(i.e. the anti-Draxin antibody) according to the invention binds to an
epitope on Draxin, which is located between amino acid residues 209-284,
preferably between amino acid residues 226-257, of a zebrafish Draxin,
preferably zebrafish DraxinA. More preferably, the antibody binds to an
epitope between amino acids 232-252 of zebrafish DraxinA.
[0064] In further preferred embodiments, the anti-Draxin antibody
according to the invention binds to an epitope on Draxin, which is
located in a region of human Draxin corresponding to amino acid residues
209-284, preferably between amino acid residues 226-257, of zebrafish
Draxin, preferably zebrafish DraxinA. More preferably, the antibody binds
to an epitope between amino acids 222-243 of human Draxin.
[0065] In preferred embodiments, the antibody directed against
.gamma.-Netrin (i.e. the anti-.gamma.-Netrin antibody) according to the
invention binds to an epitope on Netrin1, which is located between amino
acid residues 285-451 (i.e. EGF1-3), preferably between amino acid
residues 341-451 (i.e. EGF2-3), of human Netrin1 or a corresponding
epitope in another .gamma.-Netrin and/or another species, preferably to
an epitope located in the EGF1-3 domains, preferably the EGF2-3 domains
of zebrafish Netrin1a and/or Netrin1b. More preferably, the antibody
binds to an epitope between amino acids 404-451 (i.e. EGF3) of a human
.gamma.-Netrin, preferably human Netrin1 or to an epitope located in the
EGF3 domain of a zebrafish .gamma.-Netrin, preferably zebrafish Netrin1a
or Netrin1b.
[0066] The antibody or fragment or derivative thereof according to the
invention may be derived from any antibody-producing animal species.
Preferably, it is a mouse, rat or human antibody or functional antibody
fragment or antibody derivative. The antibody may be a polyclonal
antibody, a monoclonal antibody, a chimeric antibody, and/or a
recombinant antibody. Monoclonal antibodies, in particular human or
humanized monoclonal antibodies are preferred.
[0067] A monoclonal antibody (also referred to as mAB) is a single
molecular species of antibody and is usually produced by creating hybrid
antibody-forming cells from a fusion of nonsecreting myeloma cells with
immune spleen cells. Polyclonal antibodies, by contrast, are produced by
injecting an animal (such as a rodent, rabbit or goat) with an antigen,
and extracting serum from the animal. A chimeric antibody is an antibody
in which the variable domain of e.g. a murine antibody is combined with
the constant region of a human antibody. Recombinant antibodies are
obtained via genetic engineering without having to inject animals. Human
antibodies according to the invention may be prepared using transgenic
mice or by phage display; these methods are well known in the art.
[0068] In yet a further aspect, the antibodies or fragments or derivatives
thereof according to the invention are for use in medicine (as defined
above), particularly human medicine. For example, they may be used in
diagnostics to determine qualitatively or quantitatively their respective
antigens; they may also be used as a diagnostic agent for diseases with
pathologic, in particular increased target expression.
[0069] In certain embodiments of yet a further aspect, the
anti-.gamma.-Netrin antibody (including its functional fragments and
derivatives as defined herein) is for use in the prevention or treatment
of a condition associated with, accompanied by or mediated by pathologic,
particularly increased, .gamma.-Netrin, particularly Netrin1 expression
or activity, as defined herein above. This condition is preferably a
hyperproliferative disease, in particular a tumor disease.
[0070] Exemplary tumor diseases, which may be prevented or treated using
the anti-.gamma.-Netrin antibody, preferably anti-Netrin1-antibody, or
fragments or derivatives thereof according to the invention, are selected
from the group consisting of breast cancer, renal cancer, liver cancer,
prostate cancer, colorectal cancer, lung cancer, neuroblastoma,
meningioma of the brain, pituitary adenoma, glioma, glioblastoma, acute
myeloid leukemia, sarcoma, melanoma, ovarian adenocarcinoma, renal
adenocarcinoma, uterus adenocarcinoma, stomac adenocarcinoma, kidney
adenocarcinoma and rectal adenocarcinoma, pancreatic cancer, inflammation
driven cancers, particularly colorectal cancer, colorectal cancer
associated with IBD, colorectal cancer associated with ulcerative
colitis, colorectal cancer associated with Crohn's disease, and tumors
derived from inflammatory bowel disease, including metastatic and
particularly aggressive forms of these tumor diseases.
[0071] Preferably, the tumor disease is selected from the group consisting
of pancreatic cancer, colorectal cancer, breast cancer, particularly
metastatic breast cancer, and lung cancer, particularly non-small cell
lung cancer. In another embodiment, the tumor disease is neuroblastoma.
[0072] The anti-.gamma.-Netrin antibody, preferably anti-Netrin1-antibody
or fragment or derivative thereof may also be present in the form of a
pharmaceutical composition as defined above, and may also be used in
combination with further pharmaceutically active agents, particularly one
or more agent selected from the group consisting of decoy Netrin
receptors, cytostatic agents, cytotoxic agents, statins,
antihyperlipidemic agents, anti-coagulant agents, kinase inhibitors and
angiogenesis modulators. Especially preferred therapeutic agents for
combination with the anti-.gamma.-Netrin-antibody are cytostatic agents
and cytotoxic agents.
[0073] In certain embodiments of yet a further aspect, the anti-Draxin
antibody (including its functional fragments and derivatives as defined
herein) is for use in the prevention or treatment of a condition
associated with, accompanied by or mediated by pathologic, particularly
decreased, .gamma.-Netrin, particularly Netrin1 expression or activity,
as defined herein above. Likewise, the anti-Draxin antibody (including
its functional fragments and derivatives as defined herein) may be used
in the prevention or treatment of a condition associated with,
accompanied by or mediated by pathologic, particularly increased, Draxin
expression or activity.
[0074] This condition may be a cardiovascular disorder, in particular a
cardiovascular disorder which can be prevented or treated by increasing
.gamma.-Netrin, in particular Netrin1 expression and/or activity.
Exemplary cardiovascular disorders are selected from ischemia/reperfusion
(I/R) injury, e.g. renal I/R injury, I/R injury of cardiac tissue;
myocardial infarction, particularly infarcts resulting from I/R injury;
mitochondrial damage; neointimal formation and restenosis; vascular
injury or vascular dysfunction; vascular smooth muscle cell migration and
proliferation; apoptosis of endothelial progenitor cells, procure induced
restenosis; and hypertension.
[0075] A "pathologic expression or activity" of Draxin is generally meant
to encompass all situations, in which the ratio of expression and/or
activity between Draxin and any .gamma.-Netrin is abnormal. Particularly,
a pathologic Draxin expression may be or may lead to a decreased Draxin
protein level or, preferably, an increased Draxin protein level in a
given (extracellular) environment of an organism. A pathologic Draxin
activity may be an decreased or increased activity, e.g. binding to a
.gamma.-Netrin, particularly Netrin1 with a lower or higher affinity.
[0076] In yet a further aspect, the present invention relates to peptides
which bind to Draxin, in particular to human Draxin and/or zebrafish
DraxinA and/or zebrafish DraxinB, with a high specificity and a high
affinity.
[0077] Accordingly, the invention provides a Draxin-binding peptide
comprising (i) at least consecutive amino acids from the sequence
KACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCANGYQQSRSPIAPCIKIPIA PP (SEQ ID NO.:
51) or (ii) a variant thereof having a sequence identity of at least 70%,
at least 80%, at least 85%, at least 90%, or at least 95% to SEQ ID
NO.:51, wherein said peptide has a length of up to 580 amino acids and is
optionally fused to a heterologous peptide or polypeptide.
[0078] In particular, the Draxin-binding peptide comprises at least 20, at
least 30, at least 40, at least 50 consecutive amino acids from SEQ ID
NO.:51 or the complete SEQ ID NO.: 51 or a variant thereof having a
sequence identity of at least 70%, at least 80%, at least 85%, at least
90%, or at least 95% to SEQ ID NO.:51.
[0079] In some embodiments, the peptide has a length of up to 580 amino
acids, up to 500 amino acids, up to 400 amino acids, up to 300 amino
acids, up to 250 amino acids, up to 200 amino acids, up to 100 amino
acids, up to 75 amino acids, or up to 60 amino acids. Fragments
comprising up to 60 amino acids are preferred according to some
embodiments.
[0080] In some embodiments, the peptide with a length of up to 580 amino
acids comprises SEQ ID NO.: 51 or a variant thereof having a sequence
identity of at least 70%, at least 80%, at least 85%, at least 90%, or at
least 95% to SEQ ID NO.: 51 and is free of any further heterologous
peptides.
[0081] In other embodiments, the peptide with a length of up to 580 amino
acids comprises SEQ ID NO.: 51 or a variant thereof having a sequence
identity of at least 70%, at least 80%, at least 85%, at least 90%, or at
least 95% to SEQ ID NO.: 51 and is fused to a heterologous peptide or
polypeptide as defined above, preferably protein tags, immunoglobulins
(Ig) or functional fragments of immunoglobulins, wherein Ig Fc fragments,
particularly human Ig Fc fragments are preferred. Still more preferably,
the human Ig Fc fragment is a human IgG Fc fragment, e.g. a human IgG1,
IgG2, IgG3, or IgG4 Fc fragment.
[0082] In some embodiments, the peptide may also be fused to a
heterologous signal sequence, e.g. a human Netrin1-fragment comprising
SEQ ID NO.: 51 may be fused to a zebrafish signal sequence (comprising
e.g. SEQ ID NO.: 70 or 71), as shown in SEQ ID NOs.: 68 and 69.
[0083] In a further aspect, the invention relates to a Draxin-binding
peptide as defined herein for use in medicine, particularly human
medicine.
[0084] In certain embodiments of yet a further aspect, the Draxin-binding
peptide described herein is for use in the prevention or treatment of a
condition associated with, accompanied by or mediated by pathologic,
particularly decreased, .gamma.-Netrin, in particular Netrin1 expression
or activity, as defined herein above. Likewise the Draxin-binding peptide
may be used in the prevention or treatment of a condition associated
with, accompanied by or mediated by pathologic, particularly increased,
Draxin expression or activity.
[0085] This condition may be a cardiovascular disorder, in particular a
cardiovascular disorder which can be prevented or treated by increasing
.gamma.-Netrin, in particular Netrin1 expression and/or activity.
Exemplary cardiovascular disorders are selected from ischemia/reperfusion
(I/R) injury, e.g. renal I/R injury, I/R injury of cardiac tissue;
myocardial infarction, particularly infarcts resulting from I/R injury;
mitochondrial damage; neointimal formation and restenosis; vascular
injury or vascular dysfunction; vascular smooth muscle cell migration and
proliferation; apoptosis of endothelial progenitor cells, procure induced
restenosis; and hypertension.
[0086] The Draxin-binding peptide for use according to the invention may,
according to a further aspect of the invention, also be present as an
active agent in a pharmaceutical composition together with at least one
pharmaceutically acceptable carrier. The present invention thus relates
to a pharmaceutical composition comprising an Draxin-binding peptide
thereof and at least one pharmaceutically acceptable carrier and,
optionally, pharmaceutically acceptable excipients and/or adjuvants.
[0087] Still a further aspect of the present invention is a method for the
treatment of a condition associated with, accompanied by or mediated by
pathologic, particularly increased or decreased .gamma.-Netrin, in
particular Netrin1 expression or activity, comprising administering a
.gamma.-Netrin-binding peptide, a Draxin-binding peptide, an
anti-.gamma.-Netrin antibody and/or an anti-Draxin antibody as described
herein above to a subject, particularly a human subject in need thereof.
In particular, this subject suffers from a hyperproliferative disorder as
defined above.
[0088] The invention also refers to a nucleic acid molecule, preferably an
isolated nucleic acid molecule, encoding a .gamma.-Netrin-binding
peptide, particularly the Netrin1-binding peptide, the Draxin-binding
peptide, and the antibodies or fragments or derivatives thereof directed
against .gamma.-Netrin, in particular Netrin1, and/or Draxin as described
above. The term "nucleic acid molecule" encompasses a natural DNA or RNA
or a recombinantly or synthetically produced DNA, RNA or LNA or a
recombinantly produced chimeric nucleic acid molecule comprising any of
these nucleic acids either alone or in combination. For example, the
nucleic acid may be cDNA or genomic DNA corresponding to an entire gene
or a substantial portion thereof or to fragments and derivatives thereof.
The nucleotide sequence may correspond to the naturally occurring
nucleotide sequence or may contain single or multiple nucleotide
substitutions, deletions or additions. The nucleic acid may also be fused
to another nucleic acid. The nucleic acid molecule of the invention may
be in operative linkage to an expression control sequence, i.e. to a
sequence which is necessary to effect the expression of coding nucleic
acid sequences. Such expression control sequences may include promoters,
enhancers, ribosomal binding sites and/or transcription termination
sequences. Specific examples of suitable expression control sequences are
known in the art.
[0089] The nucleic acid molecule of the invention may be located on a
vector which may additionally contain a replication origin and/or a
selection marker gene. Examples of vectors are plasmids, cosmids, phages,
viruses etc.
[0090] Further, the invention refers to a recombinant cell, which
comprises the nucleic acid molecule as described above. The nucleic acid
molecule may be introduced into the recombinant cell by transformation,
transfection or transduction according to any method known in the art.
The recombinant cell may e.g. be a prokaryotic or eukaryotic cell.
Preferably, the cell is a mammalian cell, e.g. a hamster, rabbit, or
human cell. Preferably, the cell is a human cell.
[0091] The .gamma.-Netrin-binding peptide, the Draxin-binding peptide, and
the antibodies or fragments or derivatives thereof directed against
.gamma.-Netrin and/or Draxin of the invention may be prepared by a
method, wherein the cell as described above is cultured under conditions
which allow expression of the antibody encoding nucleic acid molecule.
The antibody may be collected from the cultured cell or the culture
supernatant. Preferably, the antibody is prepared from a mammalian,
particularly from a human cell.
[0092] Also encompassed by the invention are salts and solvates,
preferably pharmaceutically acceptable salts and solvates of the
disclosed peptides, in particular of the .gamma.-Netrin-, preferably
Netrin1-binding peptides and the Draxin-binding peptides.
[0093] Pharmaceutically acceptable salts may include, but are not limited
to, acid addition salts and basic salts. Examples of acid addition salts
include chloride, sulfate, hydrogen sulfate, (hydrogen) phosphate,
acetate, citrate, tosylate or mesylate salts. Examples of basic salts
include salts with inorganic cations, e.g. alkaline or alkaline earth
metal salts such as sodium, potassium, magnesium or calcium salts and
salts with organic cations such as amine salts.
[0094] A "solvate" is a complex of a peptide of the invention or a salt
thereof with solvent molecules, e.g. organic solvent molecules and/or
water.
BRIEF DESCRIPTION OF THE FIGURES
[0095] FIG. 1. Draxin directly binds Netrin1.
[0096] A) AVEXIS screen results showing that the DraxinA prey protein, in
addition to the positive control bait Matn4 (+), only binds to Netrin1a
in a protein library consisting of 171 bait proteins. B) Interaction
network of the zebrafish Netrin1 and Draxin paralogs. Consecutive screen
results show that the interaction is also conserved for the paralogs.
[0097] FIG. 2. The binding of Draxin to Netrin1 is conserved for the human
homologs and detectable across human and zebrafish proteins.
[0098] Heatmap showing results from the AVEXIS assay. The screen has been
performed in both bait-prey orientations using pentameric prey proteins.
Absorbance at 486 nm (A486 nm) has been measured after 1-hour incubation
(black: A486 nm>0.1=binding, grey: A486 nm 0.08-0.1=weak binding, 2
repeats). B) Network view of the results.
[0099] FIG. 3. Draxin protein alignment using the Clustal W method.
[0100] The alignment of human, mouse, chick, and zebrafish DraxinA and
DraxinB protein shows that the N-terminal half of the protein is poorly
conserved. In the most C-terminal part of the protein a conserved
10-cysteine containing region can be found, which resembles the
cysteine-rich region present in Dickkopf proteins.
[0101] FIG. 4. A conserved 21aa DraxinA derived peptide is sufficient for
the binding to Netrin1a.
[0102] A) By using a set of truncated and deletion containing monomeric
DraxinA preys the binding interface of DraxinA to Netrin1a has been
mapped down to a 21 amino acid region (aa232-aa252). The protein
fragments binding to Netrin1a are indicated in black, weak binding ones
in grey, and non binding fragments are depicted in white. B) and C):
Using a similar approach the DraxinA binding interface in Netrin1a has
been narrowed down to the third EGF-domain containing region
(aa401-aa458).
[0103] FIG. 5. Multiple species alignment of the Draxin derived 21 aa
peptide sequence.
[0104] The figure shows that the Netrin1 binding peptide is highly
conserved in vertebrates.
[0105] FIG. 6. DraxinA inhibits the binding of Netrin1a to Netrin
receptors.
[0106] A) Schematic representation of the AVEXIS based competition assay.
B) Purified full-length Draxin inhibits the binding of of the Netrin1a
bait to the DCC-prey proteins. C) This effect can also be seen for the
Unc5b and Neo1 (D) netrin receptors. Equal amounts of BSA (D) are not
able to inhibit the binding between Netrin and Neo1. E) Draxin is not
able to interfere with the binding of RGMc to Neo1. RGMc is another known
Neo1 ligand. (% binding: binding with inhibitor/binding without inhibitor
.times.100%, error bars indicate mean.+-.s.d.; n=4)
[0107] FIG. 7. A 21 amino acid fragment of Draxin is sufficient to
outcompete Netrin/Netrin receptor interactions.
[0108] A) Full-length DraxinA-hFc and the 21aa peptide fused to the hFc
region are able to outcompete DCC for binding to Netrin1a. In contrast
the hFc fusion of full-length DraxinA with a deletion of aa231-252 is not
able to compete for binding. None of the 3 DraxinA-hFc fusion protein
versions is able to block the binding between other known tested
receptor-ligand pairs: (B) Cntn1a/Ptprz1b, (C) Vasn/Islr2, and (D)
EphB4a/EphrinB2a. (% binding: binding with inhibitor/binding without
inhibitor .times.100%, error bars show mean.+-.s.d.; n=3)
[0109] FIG. 8. The binding of the 21aa DraxinA derived peptide is highly
specific.
[0110] A) A pentameric DraxinA aa232-252-prey protein has been screened
against a library consisting of 141 bait proteins. We only observed
binding to the Netrin1a-bait. The positive control (+) corresponds to
Matn4. B) The DraxinA aa232-252-bait has been screened against 191
pentameric prey proteins and only showed binding to the Netrin1a prey.
[0111] FIG. 9. Draxin outcompetes receptor bound Netrin1a.
[0112] A) Scheme of the experimental design. B) The inhibitory effect of
DraxinA is not decreased by already preformed Netrin1a/DCC complexes.
[0113] FIG. 10: Protein alignment of the third EGF domain of Netrins.
[0114] Protein alignment of the third EGF domain of human Netrin1,
Netrin3, Netrin4 and zebrafish Netrin1a and Netrin1b shows that this
domain is highly conserved for the .gamma.-chain netrins but not for
Netrin4 which belongs to the laminin1 .beta.-chain derived netrins. In
agreement with the protein alignment data our AVEXIS binding data
indicate that only .gamma.-chain derived Netrins can bind to Draxin.
[0115] FIG. 11: In vivo detection of the Draxin-Netrin1a interaction in
zebrafish embryos.
[0116] A) Schematic illustration of the assay design. mRNAs encoding the
indicated fluorophore tagged genes were injected into one-cell stage
zebrafish embryos and imaged at sphere stage (4 hours post fertilization
(hpf)). The imaging plane corresponded to a region approximately 15 .mu.m
beneath the enveloping layer of the embryos.
[0117] B) Single section confocal images of the embryos. (Ba, Ba', Ba'')
embryos injected with 100 pg Draxin-super folder GFP (sfGFP) mRNA
displayed uniform distribution of Draxin-sfGFP protein in the
extracellular space. In contrast injection of 100 pg of Netrin1a-sfGFP
mRNA (Bb, Bb', Bb'') resulted in dense membrane associated speckles
positive for Netrin1a-sfGFP protein. In (Ba) and (Bb) memRFP has been
used to label the cell surface. Upon co-injections of 200 pg Draxin-sfGFP
mRNA and 200 pg of Netrin1a-mCherry mRNA (Bc, Bc', Bc'') Draxin-sfGFP and
Netrin1a-mCherry proteins co-localize into membrane associated spots.
(n=7; arrowheads point to examples of co-localization; scale bars
correspond to 10 .mu.m).
[0118] FIG. 12: In situ detection of the Draxin-Netrin1a interaction in
zebrafish using an affinity probe.
[0119] A) Schematic illustration of the experiment. A
Draxin.sub.aa209-284-hFc-fusion protein was generated in HEK293-6E cells
as a probe to detect endogenous netrins. Mildly fixed 48 hpf embryos were
incubated with the affinity probe (Draxin.sub.aa209-284-hFc) and the
signal detection has been carried out by using a fluorophore tagged anti
human IgG antibody.
[0120] B) Results of the in situ detection experiments. The signal from
Draxin.sub.aa209-284-hFc-fusion probe was detectable in the floor plate
region in wild type (also abbreviated as wt) fish (Ba), and was not
detectable in netrinla and netrinlb double-knockdown embryos (Bb). The
shh:GFP transgenic line has been used for the experiments to visualize
floor plate cells. Arrowheads point to the Draxin.sub.aa209-284-hFc
derived signal. Scale bar in (Ba''), 20 .mu.m; applies to all panels.
(n>10)
[0121] FIG. 13: Heatmap depicting binding results between human DRAXIN and
Netrin signaling system members.
[0122] AVEXIS was used to test pairwise binding events in both bait/prey
orientations between human DRAXIN, the derived 21 amino acid peptide,
human Netrin family members, and two representative Netrin receptors
(DCC, UNC5B). The Matn4-bait served as an internal prey-protein control
and was used for normalization of the A486 nm values; conditioned medium
(CM) serves as negative control; n=3.
[0123] FIG. 14: Surface Plasmon Resonance Analysis of Draxin Binding.
[0124] Binding of Draxin to immobilised recombinant human Netrin1, UNC5B,
and DCC was monitored using Surface Plasmon Resonance experiments on a
Siacore 3000 instrument. See text for details.
[0125] The invention will be further illustrated by the following
examples.
EXAMPLES
[0126] Methods
[0127] AVEXIS Based Library Screen
[0128] To detect extracellular protein-protein interactions in a
high-throughput manner we used the AVEXIS assay as described in Bushell
et al. (Bushell et al., 2008) with minor modifications.
[0129] In brief: A zebrafish protein library enriched for mainly in
neuronal tissues expressed secreted proteins and extracellular domains of
cell surface proteins has been assembled. The library consists of prey
and bait proteins. Preys are composed of the extracellular domain (ECD)
of interest followed by a CD4 tag (rat Cd4d3+4) and a pentamerization
domain derived from the rat Comp protein followed by .beta.-lactamase.
For the bait proteins the ECDs are fused to a CD4 tag and a biotinylation
peptide. All proteins for the screen have been expressed by transient
transfection of Human Embryonic Kidney (HEK293-6E) cells (Durocher et
al., 2002) grown in Freestyle medium (Invitrogen) containing 1% FCS.
Supernatants have been harvested 6 days post transfection. The bait
proteins have been dialyzed against HBS (140 mM NaCl, 5 mM KCl, 2 mM
CaCl.sub.2), 1 mM MgCl2, 10 mM HEPES, pH 7.4) to remove free biotin. The
proteins in the supernatants have been quantified and normalized.
[0130] For the AVEXIS screen the supernatant dilution factors have been
adjusted to values allowing faithful detection of the interaction between
Vasn (Slit-like2) and Islr2 (Sollner and Wright, 2009) with determined KD
of 12 .mu.M and a very short half-life (t1/2 0.16 s) (in preparation).
The bait proteins have been immobilized on streptavidin coated 96 well
microtiter plates (one bait/well) and incubated for 1 hour at room
temperature. After 3 wash steps using HBS as wash buffer the baits have
been probed by 50.mu.l of normalized prey proteins. After one-hour
incubation the non-bound preys have been washed away by 2 washes with
HBST (0.05% Tween) followed by two HBS washes. Then 50.mu.l of
nitrocefin/well (0.1 mg/ml) has been added and incubated for 1 h at room
temperature. Then the absorbance at 486 nm of each well has been measured
using a .mu.Quant spectrophotometer (BIO-TEK Instruments, INC). As a
positive control for the prey proteins we used the Matn4 ECD as
mono-biotinylated bait protein. Matn4 has been shown to bind to the
coiled-coil pentamerization domain of Comp (Mann et al., 2004), which is
present in all recombinant pentameric prey proteins of our AVEXIS
library.
[0131] In the primary screen interactions were `called` if the absorbance
(at 486 nm) of a well after 1 h of incubation was .gtoreq.0.1 and 3 Sigma
above the standard deviations of the mean of all wells. All interactions
detected in the primary screen have been retested in a validation screen
by using independently produced batches of proteins.
[0132] Domain Mapping Experiments
[0133] For the binding interface mapping experiments we used monomeric
prey proteins. The concentration of the monomeric preys has been
determined as described for the AVEXIS assay (.beta.lactamase enzymatic
activity). After normalization, the monomeric preys have been screened
against a set of proteins from the library to identify and remove
promiscuous binders caused for example through improper domain boundary
design. Both prey and bait orientations were tested in the domain mapping
screen and two repeats for each orientation had been carried out.
[0134] Protein Purification
[0135] His-tagged full-length zebrafish Draxin protein
(DraxinCD4d3+46.times.His) has been expressed in HEK293-6E cells and
affinitiy purified from tissue culture supernatants using HisTrap HP
columns (GE healthcare). The correct size of the purified protein has
been checked on a protein gel.
[0136] AVEXIS Based Competition Assay
[0137] The procedure of the competition assay is based on the AVEXIS
assay. Netrin1 receptors were used as prey proteins together with
6.times.Histagged purified Draxin (potential antagonist), and probed
against Netrin1a bait proteins. The indicated concentrations of the
potential inhibitors have been added together with prey proteins. For the
competition tests with purified Draxin the concentration of the Netrin
receptor prey proteins has been adjusted to an identical threshold
binding concentration.
[0138] hFc Fusion Protein Normalization for the Competition Assay
[0139] We determined the concentration of ECD-hFc fusion proteins in
tissue culture supernatants by ELISA, using the human IgG Fc fragment
(Calbiochem) as a reference. Dilution series of the ECD-hFc containing
supernatants have been incubated over night at 4.degree. C. on 96 well
Maxisorp plates (Nunc). After 3 PBS washes the plates were blocked with
0.5% BSA containing PBS (1 h). After additional 2 PBS washes and 1-hour
incubation with an anti-human IgG (Fc specific) antibody fused to
alkaline phosphatase (SIGMA) the plates have been washed 3 times with
PBS. The detection has been carried out by addition of 50 .mu.l/well of
the AP substrate p-nitrophenylphosphate (SouthernBiotech). The substrate
turnover has been determined by measuring the absorbance at 405 nm.
[0140] In Vivo Binding Assay
[0141] To reveal whether the interaction between Draxin and Netrin1a is
detectable in vivo, an mRNA overexpression assay was designed to
visualize the localization of the two proteins in zebrafish embryos.
Constructs of full-length zebrafish Draxin and Netrin1a fused with
fluorescent proteins were generated by using the Gateway.RTM. cloning
system (Life Technologies).
[0142] Before used in the in vivo detection assay, the coding sequences of
the generated fusion proteins were cloned into AVEXIS plasmids, expressed
as preys and tested for activity against bait proteins of the
corresponding binding partner. Following constructs were selected for the
in vivo binding test: Draxin and Netrin1a C-terminally fused to
superfolder-GFP (Draxin-sfGFP, Ntn1a-sfGFP) and Netrin1a C-terminally
fused with mCherry (Ntn1a-mCherry). The corresponding capped mRNAs were
synthesized using the mMESSAGE mMACHINE SP6 or T7 Transcription Kit
(Ambion) according to manufacturer instructions. For the injections,
zebrafish embryos were dechorionated using 1 mg/ml Pronase (Roche,
11459643001) and then injected with 1 nl mRNA into the cell center at one
cell stage. Draxin-sfGFP or Netrin1a-sfGFP mRNAs were injected at 100
pg/embryo in combination with 10-15 pg/embryo of membrane-tagged RFP
(mRFP) to label the cell membranes. The same amount of mRNA (100-200
pg/embryo) was injected in the Draxin-sgGFP and Netrin1a-mCherry
coexpression experiments. The injected embryos have been cultured at
28.5.degree. C. in agarose-coated dishes. At sphere stage (4 hpf),
embryos were immobilized in 1% low-melting-point agarose in glass-bottom
Petri dishes with the animal pole facing the coverslip. The imaging plane
corresponded to a region approximately 15 .mu.m beneath the enveloping
layer of the embryos. Single plane confocal images of the embryos were
taken using a Zeiss LSM 780 NLO microscope.
[0143] In Situ Detection of Draxin Binding Partners
[0144] A netrin binding fragment of Draxin (aa209-284) fused to the Fc
region of human IgG (Draxin.sub.aa209-284-hFc) has been expressed in
HEK293-6E cells and used as an affinity probe to detect binding partners
in zebrafish embryos. Draxin.sub.aa209-284-hFc in situ staining has been
done in whole mount wild type and netrin-1 knockdown zebrafish embryos.
At 46 hpf wild type zebrafish embryos were dechorionated by for 2 hours
at RT incubation in 0.1 mg/ml Pronase. At 48 hpf embryos were prefixed
for 10 min at RT in 4% (w/v) paraformaldehyde (PFA) containing 1% Triton
X-100 (v/v). After 3 washes (each 20 min) with PBS+1% Triton X-100 the
embryos were blocked for 4 h at RT in PBS containing 0.2% BSA and 0.5%
Triton X-100. Overnight incubation at 4.degree. C. with HEK293-6E
supernatant containing the Draxin-hFc fusion protein was followed by 3
short washes (10 min each) with PBST. Subsequently the embryos were
post-fixed in 4% PFA (4 h at RT or overnight at 4.degree. C.), rinsed
shortly 3 times with PBST and incubated for 4 h at RT with an Alexa Fluor
568 goat anti human IgG antibody (Invitrogen, 1:250 dilution). After 3
washes (30 min each) in PBST the embryos were mounted in glycerol for
visualization using a Zeiss LSM 510 microscope. A shorter version of
Draxin containing the Netrin1a binding site had to be used because the
full-length version of Draxin-hFc caused uniform background staining in
zebrafish embryos probably by unspecific binding to glycosaminoglycans
(GAGs) present on cell surfaces. A series of additional control ECD-hFc
proteins have been tested, only Draxin.sub.aa209-284-hFc displayed
binding to the extracellular space of the floor plate.
[0145] Knockdown of netrin1a and netrin1b in Zebrafish Embryos
[0146] Morpholino antisense oligonucleotides (Gene-Tools) have been used
to generate zebrafish with reduced netrin protein expression levels. The
following morpholino sequences have been used to knockdown ntn1a
ATGATGGACTTACCGACACATTCGT-3', SEQ ID NO.: 80) and ntn1b
(5'-CGCACGTTACCAAAATCCTTATCAT-3', SEQ ID NO.: 81). In previous studies
both morpholinos had been shown to efficiently knockdown the
corresponding genes (Kastenhuber et aL, 2009; Suli et al.; 2006).
[0147] Surface Plasmon Resonance (SPR)
[0148] Surface Plasmon Resonance (SPR) experiments were performed on a
Biacore 3000 (GE Healthcare) at 25.degree. C. using a SA sensor chip in
0.01 M HEPES, pH 7.4, 0.15 M NaCl, 0.005% Surfactant P20 (HBS-P) running
buffer at a flow rate of 30 .mu.l/min. The instrument was used according
to manufacturer's instructions.
Example 1: DraxinA Physically Interacts with Netrin1a
[0149] Using a protein-protein interaction screen assay, designed to
identify direct interactions within a protein library consisting of
secreted proteins and extracellular domains of cell surface proteins
(Bushell et al., 2008), we carried out a large-scale screen involving
more than 40,000 binding experiments. The library we used for the screen
was strongly enriched for zebrafish proteins known to be expressed in the
developing nervous system. During this screen we identified a novel
interaction between two secreted proteins with known function in axon
guidance, Netrin1a and DraxinA. In the primary screen a DraxinA prey
protein has been tested for binding against a library consisting of 171
bait proteins, including a positive control. The DraxinA prey protein
specifically bound to the Netrin1a bait (FIG. 1A) and did not bind to any
additional proteins of the library. The interaction has been confirmed in
both bait-prey orientations in a validation screen using new protein
samples. Interestingly, both netrin1 and draxin are duplicated in
zebrafish. In subsequent binding assays we were able to show that the
Netrin1/Draxin interaction is also conserved for the paralogs Netrin1b
and DraxinB (FIG. 1B).
[0150] The AVEXIS assay is able to detect very transient and weak
interactions due to the avidity effect caused by the use of pentameric
prey proteins. Hence, in order to test whether the interaction between
Netrin1a and Draxin is transient or rather stable we used monomeric prey
proteins and probed them against the corresponding binding partners.
Using this approach, we confirmed the interaction between Netrin1a and
Draxin suggesting that this interaction is based on strong binding
between the two proteins.
Example 2: The Interaction Between Draxin and Netrin1 is Conserved for the
Human Homologs
[0151] Next we asked the question whether the interaction between Netrin1
and Draxin is conserved. By using the corresponding human homologs NTN1
and DRAXIN we were able to show that the interaction is indeed conserved.
In addition, we observed that zebrafish Netrin1a was able to bind to
human Draxin and vice versa (FIG. 2). This strongly indicates that this
newly identified interaction is conserved within vertebrate species
underscoring the biological relevance of this interaction.
Example 3: The Netrin1 Binding Region of Draxin has been Mapped Down to a
21Aa Motif
[0152] Next, we narrowed down the region in DraxinA required for binding
to Netrin1a. Zebrafish DraxinA consists of 360 amino acids (aa). The
first 23 aa are part of the signal peptide. This sequence is followed by
a poorly conserved N-terminal half of the protein (FIG. 3). In contrast,
the C-terminal half of the protein is highly conserved and ends with a 10
cysteine-containing domain (aa285-aa360). In terms of cyteine spacing
this domain is similar to domains present in the Wnt antagonist Dkk1
(Glinka et al., 1998).
[0153] To map down the Netrin1a binding region in DraxinA we generated a
series of DraxinA truncations and deletions and tested them for binding
against Netrin1a (FIG. 4). Using this approach we were able to narrow
down the binding region to a 21aa DraxinA protein fragment. In addition,
a full-length version of DraxinA lacking these 21aa completely lost the
ability to bind to Netrin1a. Additional removal of 5aa from the
N-terminal or C-terminal end of the 21aa stretch caused a dramatic
reduction of the binding ability to Netrin1a. Interestingly, the
Netrin-binding 21aa stretch (aa232-252) of DraxinA is highly conserved
cross vertebrate species (FIG. 5). It is noteworthy that, this conserved
21aa region is also highly specific for Draxin and cannot be found in
other proteins.
Example 4: Netrin1a Domain Mapping
[0154] Netrin1a is a multi-domain containing protein composed of 603 amino
acids. It consists of a laminin N-terminal domain (LamNT) encoded by
amino acid 44-282 followed by 3 laminin-type epidermal growth factor-like
domains (aa284-450), and a C-terminal domain (C345C) encoded by amino
acid 486 to 594. In order to map the DraxinA binding region in Netrin1a
we generated a set of truncated Netrin1a fragments and probed them in the
AVEXIS assay for binding against DraxinA. Using this approach we were
able to narrow down the binding region to a fragment consisting of amino
acid 401-458 (FIG. 4B). This fragment encodes the third laminin-type EGF
domain. The third EGF-domain of Netrin1a is highly conserved in
vertebrate Netrin1 homologs. For example, only a single amino acid
exchange is present in this domain between zebrafish Netrin1a
(CDCHPVGAAGKTCNQTTGQCPCKDGV TGITCNRCANGYQQSRSPIAPC; SEQ ID NO: 64) and
human Netrin1 (CDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPC; SEQ ID
NO: 65) proteins,
[0155] Interestingly, the third EGF domain of Netrin1 has recently been
shown to be required for Netrin receptor binding (Finci et al., 2014; Xu
et al., 2014). These findings offer a mechanistic explanation for our
observed competition assay results.
Example 5: DraxinA is Able to Inhibit the Binding of Netrin1a to Netrin
Receptors
[0156] By using an AVEXIS-based competition assay (FIG. 6 A) we tested
whether the binding of DraxinA to Netrin1a has an influence on Netrins
ability to bind to Netrin receptors. First we confirmed that we reliably
detected the binding of Netrin1a to Netrin receptors of the DCC/Neo1 and
Unc5 families with the AVEXIS method. We also tested whether Draxin is
able to bind to the corresponding Netrin receptors. Contrary to previous
findings (Ahmed et al., 2011), we were not able to detect direct binding
between Draxin and any of the tested Netrin receptors using the AVEXIS
platform. This has also been confirmed by a recent publication (Haddick
et al. 2014). In the competition assay the extracellular domains (ECDs)
of Netrin receptors have been used as prey proteins together with
purified full length DraxinA and probed for binding against Netrin1a bait
proteins. Using this strategy, we observed a DraxinA concentration
dependent inhibition of the binding between Netrin1a and Netrin receptors
(FIG. 6B,C,D). The inhibition is specific for DraxinA. Furthermore,
DraxinA (FIG. 6 E) is not able to block the binding of RGMc to Neo1,
another reported ligand of the corresponding receptor (Bell et al.,
2013).
Example 6: The 21Aa DraxinA Fragment Fused to the Human Fc Region of IgG
is Sufficient to Block the Binding of Netrin1a to Netrin Receptors
[0157] Next we assayed whether the 21aa DraxinA fragment fused to the
human Fc tag (Draxin.sub.aa232-252-hFc) is sufficient to outcompete
Netrin/Netrin receptor interactions.
[0158] We compared the effect of Draxin.sub.aa232-252-hFc with full-length
Draxin-hFc and a version of DraxinA where the 21aa Netrin1 binding motif
has been deleted (DraxinA.DELTA..sub.aa231-252-hFc) in the competition
assay for their ability to interfere with the binding of Netrin1a to Dcc.
The results show that Draxin.sub.aa232-252-hFc has a similar efficiency
in inhibiting the binding of Netrin1a to Dcc as the DraxinA full-length
version (Draxin-hFc). The DraxinA version with the 21 aa deletion
(DraxinA.DELTA..sub.aa231-252-hFc) is not able to compete for binding to
Netrin1a (FIG. 7). In addition we used our set of different Draxin-hFc
proteins to test whether they have an effect on other known interactions
(Cntn1a/Ptprz1b, Vasn/Islr2, EphB4a/EphrinB2a). None of the 3 Draxin-hFc
versions was able to inhibit any of the tested interactions (FIG. 7
B,C,D).
[0159] Taken together, our results show that the 21aa region is necessary
for the competition and that the Draxin.sub.aa232-252-hFc fusion protein
is also sufficient to outcompete Netrin receptors for Netrin1a binding.
Example 7: The Binding of the 21Aa DraxinA Fragment to Netrin1a is Highly
Specific
[0160] In order to determine the binding specificity of the 21aa DraxinA
peptide we used the AVEXIS assay and screened the 21aa fragment as bait
and prey against proteins from our library. In this screen against a set
of 141 bait proteins the DraxinA.sub.aa232-252-prey only bound to the
Ntn1a-bait and to the positive control bait Matn4 (FIG. 8A). Similar
results we obtained for the DraxinA.sub.aa232-252-bait protein, which
only interacted with the Ntn1a-prey in a screen against a set of 191
different prey proteins (FIG. 8B). These findings indicate that the
binding of this short 21 aa peptide to Netrin1a is highly specific.
Example 8: DraxinA Outcompetes Receptor Bound Netrin 1a
[0161] Netrin1 binds with high affinity (K.sub.d's in the low nM range) to
its receptors of the DCC- and Unc5-family (Leonardo et al., 1997). Hence,
we asked the question whether already bound Netrin1a could be displaced
from the receptors by DraxinA. In order to do so we carried out an AVEXIS
based competition assay and tested three different settings (FIG. 9A). In
one experimental setting Netrin1a-baits were preincubated with purified
DraxinA before addition of the DCC prey. In the second set of experiments
the Netrin1a-baits were incubated with a mixture of DraxinA and DCC prey
proteins, and in the third set of experiments Netrin1a-baits have been
preincubated with DCC preys followed by the addition of purified DraxinA
as inhibitor. We did not observe a difference in the %-binding response
between these 3 sets of experiments. These findings show that already
formed DCC/Netrin1a complexes can be disrupted by the addition of
DraxinA. These findings indicate that DraxinA has a higher affinity for
Netrin1a than the Netrin receptor DCC.
Example 9: In Vivo Detection of the Draxin-Netrin Interaction in Zebrafish
Embryos
[0162] To independently confirm the Draxin/Netrin1a interaction and to
test whether both proteins are able to interact in vivo, we made use of
transient protein overexpression experiments in zebrafish embryos. mRNAs
encoding Draxin fused to superfolder GFP (Draxin-sfGFP) and Netrin1a
tagged with mCherry (Netrin1a-mCherry) or superfolder GFP
(Netrin1a-sfGFP) have been injected into one-cell stage zebrafish
embryos. The distribution of the corresponding fluorophore tagged
proteins has been analyzed in sphere stage zebrafish embryos (4 hours
post fertilization) (FIG. 11A). At this developmental stage the
extracellular space width between the cells is very large, ideally suited
to visualize the localization of secreted proteins. Upon injection of
mRNA encoding Draxin-sfGFP we observed an evenly distributed signal
outside the cells in the extracellular milieu of 4 hpf zebrafish embryos
(FIG. 11 Ba). In contrast thereto, the distribution of Netrin1a-sfGFP was
restricted to cell surface sub-domains (FIG. 11 Bb).
[0163] When Draxin-sfGFP was coexpressed with Netrin1a-mCherry,
Draxin-sfGFP re-located to Netrin1a-mCherry positive membrane associated
densities (FIG. 11 Bc). This indicated that localized Netrin1a-mCherry
was able to capture diffusible Draxin-sfGFP.
[0164] The mRNA overexpression experiments showed that Draxin and Netrin1a
are able to interact with each other in vivo. To further support this we
used another strategy aiming to detect the distribution of endogenous
Draxin interaction partners at developmental stages relevant for axon
guidance decisions. From our binding assay with monomeric prey proteins
we already had hints that the interaction between Draxin and Netrin is of
high-affinity. Thus, we fused a netrin-binding fragment of the Draxin-ECD
(aa209-284) to the human Fc region to generate an affinity probe. First,
we tested this probe on zebrafish embryos from different developmental
stages. After very gentle fixation the embryos were incubated with
HEK293-6E cell supernatants containing the recombinant soluble
Draxin.sub.aa209-284-hFc protein.
[0165] Using an Alexa-Fluor 568 anti human IgG antibody to detect in situ
bound Draxin.sub.aa209-284-hFc we only detect a signal in close proximity
to the floor plate (FIG. 12A, 12Ba). Because floor plate cells express
Netrin1a and Netrin1b, we had indications that the signal detected by
using the Draxin affinity probe indeed corresponds to in the
extracellular space localized netrin. To prove this observation, we
compared 48 hpf wt embryos with netrinla and netrinlb double-knockdown
embryos (FIG. 12Ba, 12Bb). In double-knockdown embryos the signal from
the bound affinity probe was barely detectable compared to non-injected
siblings, indicating that the Draxin.sub.aa209-284-hFc probe indeed
detected netrin. Taken together, the results from our mRNA overexpression
and Draxin affinity probe experiments provide strong evidence that Draxin
and Ntn1a are able to interact in vivo in zebrafish embryos.
Example 10: Human DRAXIN/Netrin-Signaling Network
[0166] To determine the binding specificity of DRAXIN/Netrin interactions,
we carried out a pairwise binding screen between human DRAXIN and human
Netrin family members. Except Netrin-5, we included all human Netrin
family members consisting of two secreted .gamma.-Netrins (Netrin-1 and
Netrin-3) and one secreted (Netrin-4) and two GPI-linked .beta.-Netrins
(Netrin-G1 and Netrin-G2) in our binding study. Human DRAXIN and a 21
amino acid Netrin binding fragment derived thereof (SEQ ID NO.: 1) bound
to Netrin-1 and Netrin-3 but not to human .beta.-Netrin family members
(FIG. 13).
[0167] These experiments confirm for human proteins the
Draxin/.gamma.-Netrin binding specificity within the Netrin family and
showed that the human 21 amino acid DRAXIN fragment (SEQ ID NO.: 1), like
its zebrafish counterpart (SEQ ID NOs.: 3), is sufficient for binding.
Example 11: Validation of the Draxin/Netrin1 Interaction by Surface
Plasmon Resonance
[0168] Recombinant human Draxin was purchased from R&D systems.
Biotinylated recombinant human UNC5B, Netrin1 and DCC were produced
recombinantly using the described mammalian expression system
(HEK293-6E). Biotinylated proteins were immobilised on the SA coated
sensor chip and Draxin was injected sequentially in increasing
concentrations (0 nM, 1.2 nM. 2.3 nM, 4.7 nM, 9.4 nM, 18.8 nM) for 3 min.
Dissociation was allowed for 5 min in HBS-P. Binding was monitored and an
interaction of Draxin to immobilised Netrin-1 was observed with a binding
constant KO of approximately 20 to 100 nM. No binding of Draxin to UNC5B
and DCC was detected (FIG. 14).
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Sequence CWU
1
1
82121PRTHomo sapiens 1Glu Val Met Pro Thr Leu Asp Met Ala Leu Phe Asp Trp
Thr Asp Tyr1 5 10 15Glu
Asp Leu Lys Pro 20221PRTDanio rerio 2Asp Val Ala Pro Thr Phe
Asn Met Ala Leu Phe Asp Trp Thr Asp Tyr1 5
10 15Glu Asp Met Arg Pro 20321PRTDanio rerio
3Glu Val Met Pro Thr Leu Asp Met Thr Leu Phe Asp Trp Thr Asp Tyr1
5 10 15Glu Asp Met Lys Pro
204349PRTHomo sapiens 4Met Ala Gly Pro Ala Ile His Thr Ala Pro Met
Leu Phe Leu Val Leu1 5 10
15Leu Leu Pro Leu Glu Leu Ser Leu Ala Gly Ala Leu Ala Pro Gly Thr
20 25 30Pro Ala Arg Asn Leu Pro Glu
Asn His Ile Asp Leu Pro Gly Pro Ala 35 40
45Leu Trp Thr Pro Gln Ala Ser His His Arg Arg Arg Gly Pro Gly
Lys 50 55 60Lys Glu Trp Gly Pro Gly
Leu Pro Ser Gln Ala Gln Asp Gly Ala Val65 70
75 80Val Thr Ala Thr Arg Gln Ala Ser Arg Leu Pro
Glu Ala Glu Gly Leu 85 90
95Leu Pro Glu Gln Ser Pro Ala Gly Leu Leu Gln Asp Lys Asp Leu Leu
100 105 110Leu Gly Leu Ala Leu Pro
Tyr Pro Glu Lys Glu Asn Arg Pro Pro Gly 115 120
125Trp Glu Arg Thr Arg Lys Arg Ser Arg Glu His Lys Arg Arg
Arg Asp 130 135 140Arg Leu Arg Leu His
Gln Gly Arg Ala Leu Val Arg Gly Pro Ser Ser145 150
155 160Leu Met Lys Lys Ala Glu Leu Ser Glu Ala
Gln Val Leu Asp Ala Ala 165 170
175Met Glu Glu Ser Ser Thr Ser Leu Ala Pro Thr Met Phe Phe Leu Thr
180 185 190Thr Phe Glu Ala Ala
Pro Ala Thr Glu Glu Ser Leu Ile Leu Pro Val 195
200 205Thr Ser Leu Arg Pro Gln Gln Ala Gln Pro Arg Ser
Asp Gly Glu Val 210 215 220Met Pro Thr
Leu Asp Met Ala Leu Phe Asp Trp Thr Asp Tyr Glu Asp225
230 235 240Leu Lys Pro Asp Gly Trp Pro
Ser Ala Lys Lys Lys Glu Lys His Arg 245
250 255Gly Lys Leu Ser Ser Asp Gly Asn Glu Thr Ser Pro
Ala Glu Gly Glu 260 265 270Pro
Cys Asp His His Gln Asp Cys Leu Pro Gly Thr Cys Cys Asp Leu 275
280 285Arg Glu His Leu Cys Thr Pro His Asn
Arg Gly Leu Asn Asn Lys Cys 290 295
300Phe Asp Asp Cys Met Cys Val Glu Gly Leu Arg Cys Tyr Ala Lys Phe305
310 315 320His Arg Asn Arg
Arg Val Thr Arg Arg Lys Gly Arg Cys Val Glu Pro 325
330 335Glu Thr Ala Asn Gly Asp Gln Gly Ser Phe
Ile Asn Val 340 3455360PRTDanio rerio 5Met Val
Ala Pro Gly Leu Cys Gln Leu Phe Ile Leu Leu Leu Ile Thr1 5
10 15Leu Ser His Thr Leu His Ser Ser
Glu Ile Ser Ser Asp Asn Phe Lys 20 25
30Gln Ser Leu Thr Pro Ser Thr Thr Thr Ser Lys Glu His Pro Glu
Thr 35 40 45Gly Leu Thr Gly Gly
Arg Gln Gln Lys Arg His Trp Ser Gly Lys Glu 50 55
60Arg Asp Ser Ala Gly Leu Phe Ser Gln Arg His Met Asp Arg
Leu Glu65 70 75 80Asp
Asp Gly Thr Ser Met Glu Gly Leu Ser Pro Val Arg Leu Glu Met
85 90 95Gly Pro Gly Asp Thr Met Lys
Ala Glu Val His Gly Glu Val Arg Ala 100 105
110Ser Ala Gln Met Arg Gln Gly Ser His Pro Ala Glu Gly Glu
Leu Asn 115 120 125Arg Lys Gly Arg
Arg His Ser His Arg Leu Leu Ala Glu His Arg Lys 130
135 140His Gly Gly Lys Lys Asp Lys Gly Arg Gly Lys Gly
Asp Leu Ser Asp145 150 155
160Pro Glu Pro Glu Leu Asp Ser Leu Leu Lys Asp Leu Asn Ala Phe Glu
165 170 175Asp Gly Leu Asn Thr
Ser Pro Pro Asn Tyr Asn Ser Val Pro Leu Asn 180
185 190Glu Val Pro Ser Pro Leu Ser Pro Ile Leu Val Thr
Thr Ala Ile Lys 195 200 205Gly His
Pro Pro Thr Leu Pro Pro Ala Ser Thr Lys Pro Gln Lys Ser 210
215 220Ser Gln Gly Arg Thr Gln Gly Glu Val Met Pro
Thr Leu Asp Met Thr225 230 235
240Leu Phe Asp Trp Thr Asp Tyr Glu Asp Met Lys Pro Ala Asp Ser Trp
245 250 255Pro Ser Asn Lys
Arg Lys Asp Lys Arg Arg Ser Lys Asn Lys Ser Asn 260
265 270Gly Asn Thr Thr Thr Glu Ala Gly Ile Val Glu
Pro Cys Asp His His 275 280 285Leu
Asp Cys Leu Ser Gly Ser Cys Cys Asp Leu Arg Glu Phe Glu Cys 290
295 300Lys Pro His Asn Arg Gly Leu Asn Asn Lys
Cys Phe Asp Asp Cys Met305 310 315
320Cys Glu Glu Gly Leu Arg Cys Tyr Ala Lys Phe His Arg Lys Arg
Arg 325 330 335Val Thr Arg
Arg Arg Gly Arg Cys Val Asp Pro Glu Ser Val Asn Ser 340
345 350Asn Gln Gly Ala Phe Ile Thr Val
355 3606351PRTDanio rerio 6Met Ala Val Ser Cys Trp Tyr
Phe Ala Leu Phe Leu Ile Phe Asp Leu1 5 10
15Met Thr Met Thr Leu Gly Thr Asn Thr His His Asn Ser
Pro Met Glu 20 25 30Val Phe
Ser Glu Asn Ile Ile Ile Pro Pro Lys Pro Glu Ala Ser Ile 35
40 45His His His Thr His Gln Arg Thr Asp Arg
Gly Arg Lys Glu Arg Met 50 55 60Thr
Ala Ser Gln Leu Arg Glu Arg Pro Arg Ile Ala Ile Phe His Thr65
70 75 80Gln Asn Glu Gly Pro Asp
Leu Glu Gly Leu Ser Pro Val Arg Leu Glu 85
90 95Met Glu Pro Ala Asp Lys Arg Arg Val Met Thr Pro
Arg Lys Lys Thr 100 105 110Phe
Met Gly Ser Asp Ser Leu Ile Gln Glu Lys Met Asn Ile Ser Pro 115
120 125Gly Ala Glu Thr Pro Glu Lys Ala Met
Arg Arg Pro Thr Val Arg Lys 130 135
140Val Phe Gly Gly His Ile Thr Arg Ala Pro His Glu Glu Glu Ser Leu145
150 155 160Ala Ser Gly Lys
Lys Arg Arg Val Ser Phe Asp Gln Arg Leu Asn Lys 165
170 175Ala Ser Phe Gly Ser Pro Thr Glu Pro Val
Leu Pro Ala Ala Thr Val 180 185
190Gly Thr Phe Ile Leu Pro Ile Thr Ala Ala Val Asp Gly Asn Pro Asn
195 200 205Pro Ser Ser Glu Pro Gln Val
Arg Arg Tyr Leu Gly Gly Asp Val Ala 210 215
220Pro Thr Phe Asn Met Ala Leu Phe Asp Trp Thr Asp Tyr Glu Asp
Met225 230 235 240Arg Pro
Gly Asp Lys Lys Gln Tyr Ser Lys Lys Gln Gly Ser Glu Lys
245 250 255Gln Ala Thr Gln Ser Pro Ser
Thr Gly Leu Val Arg Leu Thr Ser Glu 260 265
270Asn Asn Val Cys Lys His His Leu Asp Cys Leu Pro Gly Ser
Cys Cys 275 280 285Asn Leu Arg Lys
His Val Cys Glu Leu His Asn Arg Gly Phe Asn Asn 290
295 300Lys Cys Tyr Asp Ser Cys Met Cys Glu Glu Gly Leu
Arg Cys Tyr Ala305 310 315
320Lys Ser His Arg His Tyr Arg Ile Thr Arg Lys Lys Gly Gln Cys Val
325 330 335Asp Pro Glu Asp Leu
Asn His Ala Val Ser Arg Trp Met Gln Met 340
345 350775PRTDanio rerio 7His Pro Pro Thr Leu Pro Pro Ala
Ser Thr Lys Pro Gln Lys Ser Ser1 5 10
15Gln Gly Arg Thr Gln Gly Glu Val Met Pro Thr Leu Asp Met
Thr Leu 20 25 30Phe Asp Trp
Thr Asp Tyr Glu Asp Met Lys Pro Ala Asp Ser Trp Pro 35
40 45Ser Asn Lys Arg Lys Asp Lys Arg Arg Ser Lys
Asn Lys Ser Asn Gly 50 55 60Asn Thr
Thr Thr Glu Ala Gly Ile Val Glu Pro65 70
75866PRTDanio rerio 8His Pro Pro Thr Leu Pro Pro Ala Ser Thr Lys Pro Gln
Lys Ser Ser1 5 10 15Gln
Gly Arg Thr Gln Gly Glu Val Met Pro Thr Leu Asp Met Thr Leu 20
25 30Phe Asp Trp Thr Asp Tyr Glu Asp
Met Lys Pro Ala Asp Ser Trp Pro 35 40
45Ser Asn Lys Arg Lys Asp Lys Arg Arg Ser Lys Asn Lys Ser Asn Gly
50 55 60Asn Thr65948PRTDanio rerio 9His
Pro Pro Thr Leu Pro Pro Ala Ser Thr Lys Pro Gln Lys Ser Ser1
5 10 15Gln Gly Arg Thr Gln Gly Glu
Val Met Pro Thr Leu Asp Met Thr Leu 20 25
30Phe Asp Trp Thr Asp Tyr Glu Asp Met Lys Pro Ala Asp Ser
Trp Pro 35 40 451043PRTDanio
rerio 10His Pro Pro Thr Leu Pro Pro Ala Ser Thr Lys Pro Gln Lys Ser Ser1
5 10 15Gln Gly Arg Thr
Gln Gly Glu Val Met Pro Thr Leu Asp Met Thr Leu 20
25 30Phe Asp Trp Thr Asp Tyr Glu Asp Met Lys Pro
35 401150PRTDanio rerio 11Gln Gly Arg Thr Gln Gly
Glu Val Met Pro Thr Leu Asp Met Thr Leu1 5
10 15Phe Asp Trp Thr Asp Tyr Glu Asp Met Lys Pro Ala
Asp Ser Trp Pro 20 25 30Ser
Asn Lys Arg Lys Asp Lys Arg Arg Ser Lys Asn Lys Ser Asn Gly 35
40 45Asn Thr 501232PRTDanio rerio 12Gln
Gly Arg Thr Gln Gly Glu Val Met Pro Thr Leu Asp Met Thr Leu1
5 10 15Phe Asp Trp Thr Asp Tyr Glu
Asp Met Lys Pro Ala Asp Ser Trp Pro 20 25
301327PRTDanio rerio 13Gln Gly Arg Thr Gln Gly Glu Val Met
Pro Thr Leu Asp Met Thr Leu1 5 10
15Phe Asp Trp Thr Asp Tyr Glu Asp Met Lys Pro 20
251422PRTDanio rerio 14Gly Glu Val Met Pro Thr Leu Asp Met
Thr Leu Phe Asp Trp Thr Asp1 5 10
15Tyr Glu Asp Met Lys Pro 201521PRTDanio rerio 15Glu
Val Met Pro Thr Leu Asp Met Thr Leu Phe Asp Trp Thr Asp Tyr1
5 10 15Glu Asp Met Lys Pro
201622PRTHomo sapiens 16Gly Glu Val Met Pro Thr Leu Asp Met Ala Leu Phe
Asp Trp Thr Asp1 5 10
15Tyr Glu Asp Leu Lys Pro 201722PRTDanio rerio 17Gly Asp Val
Ala Pro Thr Phe Asn Met Ala Leu Phe Asp Trp Thr Asp1 5
10 15Tyr Glu Asp Met Arg Pro
20181047DNAHomo sapiens 18atggctgggc ctgccatcca caccgctccc atgctgttcc
tcgtcctcct gctgcccctg 60gagctgagcc tggcaggcgc ccttgcacct gggacccctg
cccggaacct ccctgagaat 120cacattgacc tcccaggccc agcgctgtgg acgcctcagg
ccagccacca ccgccggcgg 180ggcccgggca agaaggagtg gggcccaggc ctgcccagcc
aggcccagga tggggctgtg 240gtcaccgcca ccaggcaggc ctccaggctg ccagaggctg
aggggctgct gcctgagcag 300agtcctgcag gcctgctgca ggacaaggac ctgctcctgg
gactggcatt gccctacccc 360gagaaggaga accgacctcc aggttgggag aggaccagga
aacgcagcag ggagcacaag 420agacgcaggg acaggttgag gctgcaccaa ggccgagcct
tggtccgagg tcccagctcc 480ctgatgaaga aggcagagct ctccgaagcc caggtgctgg
atgcagccat ggaggaatcc 540tccaccagcc tggcgcccac catgttcttt ctcaccacct
ttgaggcagc acctgccaca 600gaagagtccc tgatcctgcc cgtcacctcc ctgcggcccc
agcaggcaca gcccaggtct 660gacggggagg tgatgcccac gctggacatg gccttgttcg
actggaccga ttatgaagac 720ttaaaacctg atggttggcc ctctgcaaag aagaaagaga
aacaccgcgg taaactctcc 780agtgatggta acgaaacatc accagccgaa ggggaaccat
gcgaccatca ccaagactgc 840ctgccaggga cttgctgcga cctgcgggag catctctgca
caccccacaa ccgaggcctc 900aacaacaaat gcttcgatga ctgcatgtgt gtggaagggc
tgcgctgcta tgccaaattc 960caccggaacc gcagggttac acggaggaaa gggcgctgtg
tggagcccga gacggccaac 1020ggcgaccagg gatccttcat caacgtc
1047191080DNADanio rerio 19atggtggctc ctggcttgtg
tcaactcttc attctacttc ttataacact gtctcacact 60ttgcacagct ctgaaatctc
atctgacaat ttcaaacaga gtctgacccc ctccaccact 120acctccaagg aacaccctga
aacaggactt accggtggca gacaacaaaa gagacactgg 180tcaggcaaag aacgggatag
tgctgggctg ttttctcaaa ggcatatgga cagactggag 240gatgatggga caagtatgga
gggtctgagc cccgtaaggc tagagatggg acctggggac 300actatgaagg cagaagttca
cggtgaggtc agggcttctg ctcaaatgcg tcaaggaagt 360catccagcag aaggagagtt
aaatcgtaaa ggcagacgac atagtcacag gcttctggct 420gagcacagaa agcatggagg
caaaaaagac aaaggtcgag gtaaagggga tctcagcgac 480cctgaaccag aattagactc
cttgctgaag gacttaaatg catttgagga tggtctaaac 540acttctccac ccaattacaa
cagtgtccct ctcaatgaag ttccctcccc tctctcccct 600attttggtaa ccacggcaat
caaagggcat cccccaacac ttcccccagc ctccaccaaa 660ccccagaagt caagccaagg
caggactcaa ggtgaagtga tgcccactct ggacatgacc 720ctctttgact ggactgatta
tgaggatatg aagcctgcag acagttggcc atcaaacaaa 780agaaaagata aacgtcgcag
caaaaacaag agcaatggaa acacaacaac tgaggctgga 840attgttgaac catgtgacca
tcatcttgac tgcctttctg gttcctgttg tgacctcaga 900gaatttgaat gtaaacctca
caaccgtggc ctaaataaca agtgttttga tgactgcatg 960tgtgaggagg gtctccgatg
ttacgccaag ttccaccgca agcggagagt gacccgaaga 1020cgtggccgct gtgtggaccc
tgaatcagtc aacagcaacc aaggagcttt tattaccgtc 1080201053DNADanio rerio
20atggcagttt cctgttggta ttttgcctta tttctcatct ttgacttgat gactatgaca
60ctgggcacca acacccacca caattcacca atggaagtct tcagcgaaaa cataataatc
120ccgcccaagc cagaggcatc catacatcat cacactcatc aaaggacaga cagaggacgc
180aaggagagga tgacagccag tcagctcaga gaaagacccc gcattgccat cttccacacc
240caaaatgaag ggccagacct ggagggcctc agtcccgttc gcttagagat ggaaccggca
300gacaaacgtc gggtaatgac tcctagaaag aagaccttca tgggctctga ttccttaatt
360caagaaaaaa tgaatatttc tcctggtgcc gagactccag agaaggcgat gaggcgtccc
420actgttcgaa aagtgtttgg agggcacatc actagggctc ctcatgagga agagtctttg
480gcatcaggga agaaacggag ggtttctttt gatcaaaggc tcaataaagc ctcctttggg
540agtcccacag agccagtgct tcctgctgcc actgttggca ccttcatatt gcccataact
600gcagcagtcg atgggaatcc aaacccctca agtgaaccgc aggtcagacg ttatttaggt
660ggggatgtgg cgcccacttt taacatggcc ttatttgact ggacggatta tgaagatatg
720aggcctggag ataaaaagca atattcgaaa aagcaaggtt ctgaaaaaca ggctacacaa
780agcccaagca ctggacttgt gagacttaca tcagaaaaca atgtctgtaa acatcatctg
840gattgtctgc caggttcctg ctgcaatctc agaaagcatg tgtgtgagct tcataaccgt
900ggcttcaata acaagtgcta tgacagctgc atgtgtgagg aaggacttcg gtgctatgca
960aaatcacaca gacattaccg catcacccgc aaaaagggac agtgtgttga tcctgaggac
1020ctaaatcatg cagtcagcag atggatgcag atg
105321303DNADanio rerio 21atggtggctc ctggcttgtg tcaactcttc attctacttc
ttataacact gtctcacact 60ttgcacagct ctgaagggca tcccccaaca cttcccccag
cctccaccaa accccagaag 120tcaagccaag gcaggactca aggtgaagtg atgcccactc
tggacatgac cctctttgac 180tggactgatt atgaggatat gaagcctgca gacagttggc
catcaaacaa aagaaaagat 240aaacgtcgca gcaaaaacaa gagcaatgga aacacaacaa
ctgaggctgg aattgttgaa 300cca
30322101PRTDanio rerio 22Met Val Ala Pro Gly Leu
Cys Gln Leu Phe Ile Leu Leu Leu Ile Thr1 5
10 15Leu Ser His Thr Leu His Ser Ser Glu Gly His Pro
Pro Thr Leu Pro 20 25 30Pro
Ala Ser Thr Lys Pro Gln Lys Ser Ser Gln Gly Arg Thr Gln Gly 35
40 45Glu Val Met Pro Thr Leu Asp Met Thr
Leu Phe Asp Trp Thr Asp Tyr 50 55
60Glu Asp Met Lys Pro Ala Asp Ser Trp Pro Ser Asn Lys Arg Lys Asp65
70 75 80Lys Arg Arg Ser Lys
Asn Lys Ser Asn Gly Asn Thr Thr Thr Glu Ala 85
90 95Gly Ile Val Glu Pro
10023276DNADanio rerio 23atggtggctc ctggcttgtg tcaactcttc attctacttc
ttataacact gtctcacact 60ttgcacagct ctgaagggca tcccccaaca cttcccccag
cctccaccaa accccagaag 120tcaagccaag gcaggactca aggtgaagtg atgcccactc
tggacatgac cctctttgac 180tggactgatt atgaggatat gaagcctgca gacagttggc
catcaaacaa aagaaaagat 240aaacgtcgca gcaaaaacaa gagcaatgga aacaca
2762492PRTDanio rerio 24Met Val Ala Pro Gly Leu
Cys Gln Leu Phe Ile Leu Leu Leu Ile Thr1 5
10 15Leu Ser His Thr Leu His Ser Ser Glu Gly His Pro
Pro Thr Leu Pro 20 25 30Pro
Ala Ser Thr Lys Pro Gln Lys Ser Ser Gln Gly Arg Thr Gln Gly 35
40 45Glu Val Met Pro Thr Leu Asp Met Thr
Leu Phe Asp Trp Thr Asp Tyr 50 55
60Glu Asp Met Lys Pro Ala Asp Ser Trp Pro Ser Asn Lys Arg Lys Asp65
70 75 80Lys Arg Arg Ser Lys
Asn Lys Ser Asn Gly Asn Thr 85
9025222DNADanio rerio 25atggtggctc ctggcttgtg tcaactcttc attctacttc
ttataacact gtctcacact 60ttgcacagct ctgaagggca tcccccaaca cttcccccag
cctccaccaa accccagaag 120tcaagccaag gcaggactca aggtgaagtg atgcccactc
tggacatgac cctctttgac 180tggactgatt atgaggatat gaagcctgca gacagttggc
ca 2222674PRTDanio rerio 26Met Val Ala Pro Gly Leu
Cys Gln Leu Phe Ile Leu Leu Leu Ile Thr1 5
10 15Leu Ser His Thr Leu His Ser Ser Glu Gly His Pro
Pro Thr Leu Pro 20 25 30Pro
Ala Ser Thr Lys Pro Gln Lys Ser Ser Gln Gly Arg Thr Gln Gly 35
40 45Glu Val Met Pro Thr Leu Asp Met Thr
Leu Phe Asp Trp Thr Asp Tyr 50 55
60Glu Asp Met Lys Pro Ala Asp Ser Trp Pro65
7027207DNADanio rerio 27atggtggctc ctggcttgtg tcaactcttc attctacttc
ttataacact gtctcacact 60ttgcacagct ctgaagggca tcccccaaca cttcccccag
cctccaccaa accccagaag 120tcaagccaag gcaggactca aggtgaagtg atgcccactc
tggacatgac cctctttgac 180tggactgatt atgaggatat gaagcct
2072869PRTDanio rerio 28Met Val Ala Pro Gly Leu
Cys Gln Leu Phe Ile Leu Leu Leu Ile Thr1 5
10 15Leu Ser His Thr Leu His Ser Ser Glu Gly His Pro
Pro Thr Leu Pro 20 25 30Pro
Ala Ser Thr Lys Pro Gln Lys Ser Ser Gln Gly Arg Thr Gln Gly 35
40 45Glu Val Met Pro Thr Leu Asp Met Thr
Leu Phe Asp Trp Thr Asp Tyr 50 55
60Glu Asp Met Lys Pro6529225DNADanio rerio 29atggtggctc ctggcttgtg
tcaactcttc attctacttc ttataacact gtctcacact 60ttgcacagct ctgaacaagg
caggactcaa ggtgaagtga tgcccactct ggacatgacc 120ctctttgact ggactgatta
tgaggatatg aagcctgcag acagttggcc atcaaacaaa 180agaaaagata aacgtcgcag
caaaaacaag agcaatggaa acaca 2253075PRTDanio rerio
30Met Val Ala Pro Gly Leu Cys Gln Leu Phe Ile Leu Leu Leu Ile Thr1
5 10 15Leu Ser His Thr Leu His
Ser Ser Glu Gln Gly Arg Thr Gln Gly Glu 20 25
30Val Met Pro Thr Leu Asp Met Thr Leu Phe Asp Trp Thr
Asp Tyr Glu 35 40 45Asp Met Lys
Pro Ala Asp Ser Trp Pro Ser Asn Lys Arg Lys Asp Lys 50
55 60Arg Arg Ser Lys Asn Lys Ser Asn Gly Asn Thr65
70 7531171DNADanio rerio 31atggtggctc
ctggcttgtg tcaactcttc attctacttc ttataacact gtctcacact 60ttgcacagct
ctgaacaagg caggactcaa ggtgaagtga tgcccactct ggacatgacc 120ctctttgact
ggactgatta tgaggatatg aagcctgcag acagttggcc a 1713257PRTDanio
rerio 32Met Val Ala Pro Gly Leu Cys Gln Leu Phe Ile Leu Leu Leu Ile Thr1
5 10 15Leu Ser His Thr
Leu His Ser Ser Glu Gln Gly Arg Thr Gln Gly Glu 20
25 30Val Met Pro Thr Leu Asp Met Thr Leu Phe Asp
Trp Thr Asp Tyr Glu 35 40 45Asp
Met Lys Pro Ala Asp Ser Trp Pro 50 5533156DNADanio
rerio 33atggtggctc ctggcttgtg tcaactcttc attctacttc ttataacact gtctcacact
60ttgcacagct ctgaacaagg caggactcaa ggtgaagtga tgcccactct ggacatgacc
120ctctttgact ggactgatta tgaggatatg aagcct
1563452PRTDanio rerio 34Met Val Ala Pro Gly Leu Cys Gln Leu Phe Ile Leu
Leu Leu Ile Thr1 5 10
15Leu Ser His Thr Leu His Ser Ser Glu Gln Gly Arg Thr Gln Gly Glu
20 25 30Val Met Pro Thr Leu Asp Met
Thr Leu Phe Asp Trp Thr Asp Tyr Glu 35 40
45Asp Met Lys Pro 5035141DNADanio rerio 35atggtggctc
ctggcttgtg tcaactcttc attctacttc ttataacact gtctcacact 60ttgcacagct
ctgaaggtga agtgatgccc actctggaca tgaccctctt tgactggact 120gattatgagg
atatgaagcc t 1413647PRTDanio
rerio 36Met Val Ala Pro Gly Leu Cys Gln Leu Phe Ile Leu Leu Leu Ile Thr1
5 10 15Leu Ser His Thr
Leu His Ser Ser Glu Gly Glu Val Met Pro Thr Leu 20
25 30Asp Met Thr Leu Phe Asp Trp Thr Asp Tyr Glu
Asp Met Lys Pro 35 40
45371809DNADanio rerio 37atggtgagag tctctgatgc tttggtcact ttggtgactc
tctgctgtgt gctcaaaggg 60actgtcggcg gatatggaat gagcatgttc gccgctcaga
cctccccgcc ggatccgtgt 120tacgacgaga acggacaccc cagaagatgc atccccgact
tcgtaaacgc ggcgttcggg 180aaagaagtac gcgcgtccag cacctgcggc aaaacgccga
gtcgttactg cgtggtgacc 240gagaaagggg acgaaagaca cagaaactgc cacacgtgcg
acgcgtcaga cccaaagaag 300aatcacccac cagcttacct gaccgacctg aacaatcctc
acaatctcac ctgctggcag 360tcggacaatt acctccagta tcctcaaaac gtcactttaa
ctttatcctt gggcaagaaa 420tttgaggtga cctacgtgag tttgcagttc tgctcacctc
gaccggagtc tatggcgatc 480tttaaatcga tggactacgg aaagtcctgg gtgcctttcc
agtactactc gacccagtgt 540agaaagatgt acaacaagcc cagcaaagcc acgattacta
agcagaacga gcaagaggcc 600atctgcacag attctcacac cgacatgcat cctctctccg
gcgggctgat cgcgttcagc 660accctggacg ggcgaccctc cgcgcacgac tttgacaatt
cacccgtact tcaggactgg 720gtgaccgcca ctgacattaa ggtgactttc agccgcctgc
acactttcgg agacgaaaac 780gaggatgact cggagctggc cagagattcc tatttttacg
cagtttccga cctgcaggtt 840ggaggcagat gtaagtgtaa tggacacgca tcacggtgcg
tcaaagaccg ggatggaaac 900ctagtgtgcg agtgcaagca caacacagcc ggaccagagt
gtgacagatg caaacctttt 960cactatgacc gaccctggca gcgcgcaacc gccagagaag
ccaacgaatg tgtcgcctgc 1020aattgtaacc ttcatgcgag gcgctgtcgt ttcaacatgg
agctttacaa actctctgga 1080aggaaaagtg gaggagtctg tctgaactgc cgccacaata
cagctggtcg ccactgccac 1140tactgcaaag agggctacta tagagacatg tccaagccca
tctcccacag aaaggcctgc 1200aaagcctgtg attgccatcc tgtgggggcc gcgggcaaaa
cctgtaacca aaccacaggc 1260caatgcccct gtaaagacgg tgtgacgggt atcacatgca
accgttgtgc taacggctac 1320cagcagagcc gatcacccat tgccccctgc ataaaaattc
ccatcgctcc gccaaccacc 1380actgcaagca gcacagaaga gccatcagac tgtgaatcct
actgcaaggc atccaaaggc 1440aagctgaaga tcaatatgaa gaagtactgc aagaaagatt
atgccgttca agtccacatc 1500ctgaaagcag ataaagcagg agagtggtgg aagttcaccg
tcaacatcat ctctgtttac 1560aaacagggtg aaagccgaat tcgcagagga gaccagttcc
tctgggtcag ggcaaaggat 1620gtggcctgca agtgtccgaa gatcaagtcc ggcaagaaat
accttctgct ggggaacgac 1680gaggattcgc caggacaaag cggaatggtg gcggacaagg
gcagtctggt cattcagtgg 1740agagacactt gggctcggag actccggaag tttcagcaaa
gggagaagaa aggaaaatgc 1800aagaaagca
180938603PRTDanio rerio 38Met Val Arg Val Ser Asp
Ala Leu Val Thr Leu Val Thr Leu Cys Cys1 5
10 15Val Leu Lys Gly Thr Val Gly Gly Tyr Gly Met Ser
Met Phe Ala Ala 20 25 30Gln
Thr Ser Pro Pro Asp Pro Cys Tyr Asp Glu Asn Gly His Pro Arg 35
40 45Arg Cys Ile Pro Asp Phe Val Asn Ala
Ala Phe Gly Lys Glu Val Arg 50 55
60Ala Ser Ser Thr Cys Gly Lys Thr Pro Ser Arg Tyr Cys Val Val Thr65
70 75 80Glu Lys Gly Asp Glu
Arg His Arg Asn Cys His Thr Cys Asp Ala Ser 85
90 95Asp Pro Lys Lys Asn His Pro Pro Ala Tyr Leu
Thr Asp Leu Asn Asn 100 105
110Pro His Asn Leu Thr Cys Trp Gln Ser Asp Asn Tyr Leu Gln Tyr Pro
115 120 125Gln Asn Val Thr Leu Thr Leu
Ser Leu Gly Lys Lys Phe Glu Val Thr 130 135
140Tyr Val Ser Leu Gln Phe Cys Ser Pro Arg Pro Glu Ser Met Ala
Ile145 150 155 160Phe Lys
Ser Met Asp Tyr Gly Lys Ser Trp Val Pro Phe Gln Tyr Tyr
165 170 175Ser Thr Gln Cys Arg Lys Met
Tyr Asn Lys Pro Ser Lys Ala Thr Ile 180 185
190Thr Lys Gln Asn Glu Gln Glu Ala Ile Cys Thr Asp Ser His
Thr Asp 195 200 205Met His Pro Leu
Ser Gly Gly Leu Ile Ala Phe Ser Thr Leu Asp Gly 210
215 220Arg Pro Ser Ala His Asp Phe Asp Asn Ser Pro Val
Leu Gln Asp Trp225 230 235
240Val Thr Ala Thr Asp Ile Lys Val Thr Phe Ser Arg Leu His Thr Phe
245 250 255Gly Asp Glu Asn Glu
Asp Asp Ser Glu Leu Ala Arg Asp Ser Tyr Phe 260
265 270Tyr Ala Val Ser Asp Leu Gln Val Gly Gly Arg Cys
Lys Cys Asn Gly 275 280 285His Ala
Ser Arg Cys Val Lys Asp Arg Asp Gly Asn Leu Val Cys Glu 290
295 300Cys Lys His Asn Thr Ala Gly Pro Glu Cys Asp
Arg Cys Lys Pro Phe305 310 315
320His Tyr Asp Arg Pro Trp Gln Arg Ala Thr Ala Arg Glu Ala Asn Glu
325 330 335Cys Val Ala Cys
Asn Cys Asn Leu His Ala Arg Arg Cys Arg Phe Asn 340
345 350Met Glu Leu Tyr Lys Leu Ser Gly Arg Lys Ser
Gly Gly Val Cys Leu 355 360 365Asn
Cys Arg His Asn Thr Ala Gly Arg His Cys His Tyr Cys Lys Glu 370
375 380Gly Tyr Tyr Arg Asp Met Ser Lys Pro Ile
Ser His Arg Lys Ala Cys385 390 395
400Lys Ala Cys Asp Cys His Pro Val Gly Ala Ala Gly Lys Thr Cys
Asn 405 410 415Gln Thr Thr
Gly Gln Cys Pro Cys Lys Asp Gly Val Thr Gly Ile Thr 420
425 430Cys Asn Arg Cys Ala Asn Gly Tyr Gln Gln
Ser Arg Ser Pro Ile Ala 435 440
445Pro Cys Ile Lys Ile Pro Ile Ala Pro Pro Thr Thr Thr Ala Ser Ser 450
455 460Thr Glu Glu Pro Ser Asp Cys Glu
Ser Tyr Cys Lys Ala Ser Lys Gly465 470
475 480Lys Leu Lys Ile Asn Met Lys Lys Tyr Cys Lys Lys
Asp Tyr Ala Val 485 490
495Gln Val His Ile Leu Lys Ala Asp Lys Ala Gly Glu Trp Trp Lys Phe
500 505 510Thr Val Asn Ile Ile Ser
Val Tyr Lys Gln Gly Glu Ser Arg Ile Arg 515 520
525Arg Gly Asp Gln Phe Leu Trp Val Arg Ala Lys Asp Val Ala
Cys Lys 530 535 540Cys Pro Lys Ile Lys
Ser Gly Lys Lys Tyr Leu Leu Leu Gly Asn Asp545 550
555 560Glu Asp Ser Pro Gly Gln Ser Gly Met Val
Ala Asp Lys Gly Ser Leu 565 570
575Val Ile Gln Trp Arg Asp Thr Trp Ala Arg Arg Leu Arg Lys Phe Gln
580 585 590Gln Arg Glu Lys Lys
Gly Lys Cys Lys Lys Ala 595 600391374DNADanio
rerio 39atggtaagga ttttggtaac gtgcgtctcc atggtgtcca tcacctcgat ggtgtccggt
60gctcgcggtg gatacgggat gagcatgttc gcggctcagt cctctcctcc ggacccgtgc
120tacgacgaga acgggaaccc cagacgctgc atccccgact tcgtgaactc cgctttcggg
180aaggacgtgc gcgtgtccag cacctgcggc tctcctccgt cgcgctactg cgtggtgacc
240gagaaaggcg aggagagatc gagggactgc aacatctgcg acgccacaga ccccaaaaag
300acccatccgc ccgcatacct gacagacctc aacaaccctc ataacctcac ctgctggcag
360tcggagaact acgtgcaata cccgcagaac gtgactctga ctctgtcttt ggggaagaag
420tttgaagtga cttatgtgag cctccagttc tgctctcctc gccccgaatc catggccatc
480ttcaaatcca tggactatgg gaaaacctgg gtgccttttc agttctactc aacccagtgc
540aagaaaatgt acaacaagcc cagcaaagct gccatcacca agcagaacga gcaggaggcg
600atctgcacgg actctcacac ggacatgcag ccgttaaccg gcggcctcat cgcgttcagc
660acgctggatg gcagaccgtc cgcgcacgac ttcgacaact cgcccgtcct gcaggactgg
720gtcacggcca ccgacatcaa agtgaccttc aaccggctgc acacgttcgg ggatgagaac
780gaggacgatt cggagctcgc cagggactcg tatttttacg cggtgtctga cctgcaggtc
840ggtggacggt gtaagtgtaa cgggcacgcg tcgaagtgcg tgaaggaccg ggaaggaaac
900ctagtgtgcg aatgcaagca caacactgcg ggaccagagt gtgacaggtg taaacccttc
960cactacgacc ggccctggca gcgcgcgact gccagagagg cgaacgagtg tgtcgcttgt
1020cactgtaacc tacatgcccg ccgctgccgc ttcaacatgg agctgtataa gttgtcaggc
1080cgcaggagtg gaggagtctg cctgaactgc agacacaaca ccgccggacg ccactgccac
1140tactgtaaag agggctacta cagagacatg agcaaggcta tatcacaccg acgtgcatgc
1200aaagcctgcg attgtcatcc tgttggtgca gctggtaaga cctgtaacca gacaactgga
1260cagtgtccat gtaaagatgg tgtgactggc atcacctgta atcgctgtgc taaaggatac
1320cagcagagca gatcacccat cgccccctgt atcaaaattc cagttgctgc tccc
137440458PRTDanio rerio 40Met Val Arg Ile Leu Val Thr Cys Val Ser Met Val
Ser Ile Thr Ser1 5 10
15Met Val Ser Gly Ala Arg Gly Gly Tyr Gly Met Ser Met Phe Ala Ala
20 25 30Gln Ser Ser Pro Pro Asp Pro
Cys Tyr Asp Glu Asn Gly Asn Pro Arg 35 40
45Arg Cys Ile Pro Asp Phe Val Asn Ser Ala Phe Gly Lys Asp Val
Arg 50 55 60Val Ser Ser Thr Cys Gly
Ser Pro Pro Ser Arg Tyr Cys Val Val Thr65 70
75 80Glu Lys Gly Glu Glu Arg Ser Arg Asp Cys Asn
Ile Cys Asp Ala Thr 85 90
95Asp Pro Lys Lys Thr His Pro Pro Ala Tyr Leu Thr Asp Leu Asn Asn
100 105 110Pro His Asn Leu Thr Cys
Trp Gln Ser Glu Asn Tyr Val Gln Tyr Pro 115 120
125Gln Asn Val Thr Leu Thr Leu Ser Leu Gly Lys Lys Phe Glu
Val Thr 130 135 140Tyr Val Ser Leu Gln
Phe Cys Ser Pro Arg Pro Glu Ser Met Ala Ile145 150
155 160Phe Lys Ser Met Asp Tyr Gly Lys Thr Trp
Val Pro Phe Gln Phe Tyr 165 170
175Ser Thr Gln Cys Lys Lys Met Tyr Asn Lys Pro Ser Lys Ala Ala Ile
180 185 190Thr Lys Gln Asn Glu
Gln Glu Ala Ile Cys Thr Asp Ser His Thr Asp 195
200 205Met Gln Pro Leu Thr Gly Gly Leu Ile Ala Phe Ser
Thr Leu Asp Gly 210 215 220Arg Pro Ser
Ala His Asp Phe Asp Asn Ser Pro Val Leu Gln Asp Trp225
230 235 240Val Thr Ala Thr Asp Ile Lys
Val Thr Phe Asn Arg Leu His Thr Phe 245
250 255Gly Asp Glu Asn Glu Asp Asp Ser Glu Leu Ala Arg
Asp Ser Tyr Phe 260 265 270Tyr
Ala Val Ser Asp Leu Gln Val Gly Gly Arg Cys Lys Cys Asn Gly 275
280 285His Ala Ser Lys Cys Val Lys Asp Arg
Glu Gly Asn Leu Val Cys Glu 290 295
300Cys Lys His Asn Thr Ala Gly Pro Glu Cys Asp Arg Cys Lys Pro Phe305
310 315 320His Tyr Asp Arg
Pro Trp Gln Arg Ala Thr Ala Arg Glu Ala Asn Glu 325
330 335Cys Val Ala Cys His Cys Asn Leu His Ala
Arg Arg Cys Arg Phe Asn 340 345
350Met Glu Leu Tyr Lys Leu Ser Gly Arg Arg Ser Gly Gly Val Cys Leu
355 360 365Asn Cys Arg His Asn Thr Ala
Gly Arg His Cys His Tyr Cys Lys Glu 370 375
380Gly Tyr Tyr Arg Asp Met Ser Lys Ala Ile Ser His Arg Arg Ala
Cys385 390 395 400Lys Ala
Cys Asp Cys His Pro Val Gly Ala Ala Gly Lys Thr Cys Asn
405 410 415Gln Thr Thr Gly Gln Cys Pro
Cys Lys Asp Gly Val Thr Gly Ile Thr 420 425
430Cys Asn Arg Cys Ala Lys Gly Tyr Gln Gln Ser Arg Ser Pro
Ile Ala 435 440 445Pro Cys Ile Lys
Ile Pro Val Ala Ala Pro 450 455411374DNADanio rerio
41atggtgagag tctctgatgc tttggtcact ttggtgactc tctgctgtgt gctcaaaggg
60actgtcggcg gatatggaat gagcatgttc gccgctcaga cctccccgcc ggatccgtgt
120tacgacgaga acggacaccc cagaagatgc atccccgact tcgtaaacgc ggcgttcggg
180aaagaagtac gcgcgtccag cacctgcggc aaaacgccga gtcgttactg cgtggtgacc
240gagaaagggg acgaaagaca cagaaactgc cacacgtgcg acgcgtcaga cccaaagaag
300aatcacccac cagcttacct gaccgacctg aacaatcctc acaatctcac ctgctggcag
360tcggacaatt acctccagta tcctcaaaac gtcactttaa ctttatcctt gggcaagaaa
420tttgaggtga cctacgtgag tttgcagttc tgctcacctc gaccggagtc tatggcgatc
480tttaaatcga tggactacgg aaagtcctgg gtgcctttcc agtactactc gacccagtgt
540agaaagatgt acaacaagcc cagcaaagcc acgattacta agcagaacga gcaagaggcc
600atctgcacag attctcacac cgacatgcat cctctctccg gcgggctgat cgcgttcagc
660accctggacg ggcgaccctc cgcgcacgac tttgacaatt cacccgtact tcaggactgg
720gtgaccgcca ctgacattaa ggtgactttc agccgcctgc acactttcgg agacgaaaac
780gaggatgact cggagctggc cagagattcc tatttttacg cagtttccga cctgcaggtt
840ggaggcagat gtaagtgtaa tggacacgca tcacggtgcg tcaaagaccg ggatggaaac
900ctagtgtgcg agtgcaagca caacacagcc ggaccagagt gtgacagatg caaacctttt
960cactatgacc gaccctggca gcgcgcaacc gccagagaag ccaacgaatg tgtcgcctgc
1020aattgtaacc ttcatgcgag gcgctgtcgt ttcaacatgg agctttacaa actctctgga
1080aggaaaagtg gaggagtctg tctgaactgc cgccacaata cagctggtcg ccactgccac
1140tactgcaaag agggctacta tagagacatg tccaagccca tctcccacag aaaggcctgc
1200aaagcctgtg attgccatcc tgtgggggcc gcgggcaaaa cctgtaacca aaccacaggc
1260caatgcccct gtaaagacgg tgtgacgggt atcacatgca accgttgtgc taacggctac
1320cagcagagcc gatcacccat tgccccctgc ataaaaattc ccatcgctcc gcca
137442458PRTDanio rerio 42Met Val Arg Val Ser Asp Ala Leu Val Thr Leu Val
Thr Leu Cys Cys1 5 10
15Val Leu Lys Gly Thr Val Gly Gly Tyr Gly Met Ser Met Phe Ala Ala
20 25 30Gln Thr Ser Pro Pro Asp Pro
Cys Tyr Asp Glu Asn Gly His Pro Arg 35 40
45Arg Cys Ile Pro Asp Phe Val Asn Ala Ala Phe Gly Lys Glu Val
Arg 50 55 60Ala Ser Ser Thr Cys Gly
Lys Thr Pro Ser Arg Tyr Cys Val Val Thr65 70
75 80Glu Lys Gly Asp Glu Arg His Arg Asn Cys His
Thr Cys Asp Ala Ser 85 90
95Asp Pro Lys Lys Asn His Pro Pro Ala Tyr Leu Thr Asp Leu Asn Asn
100 105 110Pro His Asn Leu Thr Cys
Trp Gln Ser Asp Asn Tyr Leu Gln Tyr Pro 115 120
125Gln Asn Val Thr Leu Thr Leu Ser Leu Gly Lys Lys Phe Glu
Val Thr 130 135 140Tyr Val Ser Leu Gln
Phe Cys Ser Pro Arg Pro Glu Ser Met Ala Ile145 150
155 160Phe Lys Ser Met Asp Tyr Gly Lys Ser Trp
Val Pro Phe Gln Tyr Tyr 165 170
175Ser Thr Gln Cys Arg Lys Met Tyr Asn Lys Pro Ser Lys Ala Thr Ile
180 185 190Thr Lys Gln Asn Glu
Gln Glu Ala Ile Cys Thr Asp Ser His Thr Asp 195
200 205Met His Pro Leu Ser Gly Gly Leu Ile Ala Phe Ser
Thr Leu Asp Gly 210 215 220Arg Pro Ser
Ala His Asp Phe Asp Asn Ser Pro Val Leu Gln Asp Trp225
230 235 240Val Thr Ala Thr Asp Ile Lys
Val Thr Phe Ser Arg Leu His Thr Phe 245
250 255Gly Asp Glu Asn Glu Asp Asp Ser Glu Leu Ala Arg
Asp Ser Tyr Phe 260 265 270Tyr
Ala Val Ser Asp Leu Gln Val Gly Gly Arg Cys Lys Cys Asn Gly 275
280 285His Ala Ser Arg Cys Val Lys Asp Arg
Asp Gly Asn Leu Val Cys Glu 290 295
300Cys Lys His Asn Thr Ala Gly Pro Glu Cys Asp Arg Cys Lys Pro Phe305
310 315 320His Tyr Asp Arg
Pro Trp Gln Arg Ala Thr Ala Arg Glu Ala Asn Glu 325
330 335Cys Val Ala Cys Asn Cys Asn Leu His Ala
Arg Arg Cys Arg Phe Asn 340 345
350Met Glu Leu Tyr Lys Leu Ser Gly Arg Lys Ser Gly Gly Val Cys Leu
355 360 365Asn Cys Arg His Asn Thr Ala
Gly Arg His Cys His Tyr Cys Lys Glu 370 375
380Gly Tyr Tyr Arg Asp Met Ser Lys Pro Ile Ser His Arg Lys Ala
Cys385 390 395 400Lys Ala
Cys Asp Cys His Pro Val Gly Ala Ala Gly Lys Thr Cys Asn
405 410 415Gln Thr Thr Gly Gln Cys Pro
Cys Lys Asp Gly Val Thr Gly Ile Thr 420 425
430Cys Asn Arg Cys Ala Asn Gly Tyr Gln Gln Ser Arg Ser Pro
Ile Ala 435 440 445Pro Cys Ile Lys
Ile Pro Ile Ala Pro Pro 450 45543684DNADanio rerio
43atggtgagag tctctgatgc tttggtcact ttggtgactc tctgctgtgt gctcaaaggg
60actgtcggcg gatatggagg agacgaaaac gaggatgact cggagctggc cagagattcc
120tatttttacg cagtttccga cctgcaggtt ggaggcagat gtaagtgtaa tggacacgca
180tcacggtgcg tcaaagaccg ggatggaaac ctagtgtgcg agtgcaagca caacacagcc
240ggaccagagt gtgacagatg caaacctttt cactatgacc gaccctggca gcgcgcaacc
300gccagagaag ccaacgaatg tgtcgcctgc aattgtaacc ttcatgcgag gcgctgtcgt
360ttcaacatgg agctttacaa actctctgga aggaaaagtg gaggagtctg tctgaactgc
420cgccacaata cagctggtcg ccactgccac tactgcaaag agggctacta tagagacatg
480tccaagccca tctcccacag aaaggcctgc aaagcctgtg attgccatcc tgtgggggcc
540gcgggcaaaa cctgtaacca aaccacaggc caatgcccct gtaaagacgg tgtgacgggt
600atcacatgca accgttgtgc taacggctac cagcagagcc gatcacccat tgccccctgc
660ataaaaattc ccatcgctcc gcca
68444228PRTDanio rerio 44Met Val Arg Val Ser Asp Ala Leu Val Thr Leu Val
Thr Leu Cys Cys1 5 10
15Val Leu Lys Gly Thr Val Gly Gly Tyr Gly Gly Asp Glu Asn Glu Asp
20 25 30Asp Ser Glu Leu Ala Arg Asp
Ser Tyr Phe Tyr Ala Val Ser Asp Leu 35 40
45Gln Val Gly Gly Arg Cys Lys Cys Asn Gly His Ala Ser Arg Cys
Val 50 55 60Lys Asp Arg Asp Gly Asn
Leu Val Cys Glu Cys Lys His Asn Thr Ala65 70
75 80Gly Pro Glu Cys Asp Arg Cys Lys Pro Phe His
Tyr Asp Arg Pro Trp 85 90
95Gln Arg Ala Thr Ala Arg Glu Ala Asn Glu Cys Val Ala Cys Asn Cys
100 105 110Asn Leu His Ala Arg Arg
Cys Arg Phe Asn Met Glu Leu Tyr Lys Leu 115 120
125Ser Gly Arg Lys Ser Gly Gly Val Cys Leu Asn Cys Arg His
Asn Thr 130 135 140Ala Gly Arg His Cys
His Tyr Cys Lys Glu Gly Tyr Tyr Arg Asp Met145 150
155 160Ser Lys Pro Ile Ser His Arg Lys Ala Cys
Lys Ala Cys Asp Cys His 165 170
175Pro Val Gly Ala Ala Gly Lys Thr Cys Asn Gln Thr Thr Gly Gln Cys
180 185 190Pro Cys Lys Asp Gly
Val Thr Gly Ile Thr Cys Asn Arg Cys Ala Asn 195
200 205Gly Tyr Gln Gln Ser Arg Ser Pro Ile Ala Pro Cys
Ile Lys Ile Pro 210 215 220Ile Ala Pro
Pro22545202PRTDanio rerio 45Gly Asp Glu Asn Glu Asp Asp Ser Glu Leu Ala
Arg Asp Ser Tyr Phe1 5 10
15Tyr Ala Val Ser Asp Leu Gln Val Gly Gly Arg Cys Lys Cys Asn Gly
20 25 30His Ala Ser Arg Cys Val Lys
Asp Arg Asp Gly Asn Leu Val Cys Glu 35 40
45Cys Lys His Asn Thr Ala Gly Pro Glu Cys Asp Arg Cys Lys Pro
Phe 50 55 60His Tyr Asp Arg Pro Trp
Gln Arg Ala Thr Ala Arg Glu Ala Asn Glu65 70
75 80Cys Val Ala Cys Asn Cys Asn Leu His Ala Arg
Arg Cys Arg Phe Asn 85 90
95Met Glu Leu Tyr Lys Leu Ser Gly Arg Lys Ser Gly Gly Val Cys Leu
100 105 110Asn Cys Arg His Asn Thr
Ala Gly Arg His Cys His Tyr Cys Lys Glu 115 120
125Gly Tyr Tyr Arg Asp Met Ser Lys Pro Ile Ser His Arg Lys
Ala Cys 130 135 140Lys Ala Cys Asp Cys
His Pro Val Gly Ala Ala Gly Lys Thr Cys Asn145 150
155 160Gln Thr Thr Gly Gln Cys Pro Cys Lys Asp
Gly Val Thr Gly Ile Thr 165 170
175Cys Asn Arg Cys Ala Asn Gly Tyr Gln Gln Ser Arg Ser Pro Ile Ala
180 185 190Pro Cys Ile Lys Ile
Pro Ile Ala Pro Pro 195 20046468DNADanio rerio
46atggtgagag tctctgatgc tttggtcact ttggtgactc tctgctgtgt gctcaaaggg
60actgtcggcg gatatggacc tgcatcgcct gcctcacccg cttctgtcgc ctgcaattgt
120aaccttcatg cgaggcgctg tcgtttcaac atggagcttt acaaactctc tggaaggaaa
180agtggaggag tctgtctgaa ctgccgccac aatacagctg gtcgccactg ccactactgc
240aaagagggct actatagaga catgtccaag cccatctccc acagaaaggc ctgcaaagcc
300tgtgattgcc atcctgtggg ggccgcgggc aaaacctgta accaaaccac aggccaatgc
360ccctgtaaag acggtgtgac gggtatcaca tgcaaccgtt gtgctaacgg ctaccagcag
420agccgatcac ccattgcccc ctgcataaaa attcccatcg ctccgcca
46847156PRTDanio rerio 47Met Val Arg Val Ser Asp Ala Leu Val Thr Leu Val
Thr Leu Cys Cys1 5 10
15Val Leu Lys Gly Thr Val Gly Gly Tyr Gly Pro Ala Ser Pro Ala Ser
20 25 30Pro Ala Ser Val Ala Cys Asn
Cys Asn Leu His Ala Arg Arg Cys Arg 35 40
45Phe Asn Met Glu Leu Tyr Lys Leu Ser Gly Arg Lys Ser Gly Gly
Val 50 55 60Cys Leu Asn Cys Arg His
Asn Thr Ala Gly Arg His Cys His Tyr Cys65 70
75 80Lys Glu Gly Tyr Tyr Arg Asp Met Ser Lys Pro
Ile Ser His Arg Lys 85 90
95Ala Cys Lys Ala Cys Asp Cys His Pro Val Gly Ala Ala Gly Lys Thr
100 105 110Cys Asn Gln Thr Thr Gly
Gln Cys Pro Cys Lys Asp Gly Val Thr Gly 115 120
125Ile Thr Cys Asn Arg Cys Ala Asn Gly Tyr Gln Gln Ser Arg
Ser Pro 130 135 140Ile Ala Pro Cys Ile
Lys Ile Pro Ile Ala Pro Pro145 150
15548121PRTDanio rerio 48Val Ala Cys Asn Cys Asn Leu His Ala Arg Arg Cys
Arg Phe Asn Met1 5 10
15Glu Leu Tyr Lys Leu Ser Gly Arg Lys Ser Gly Gly Val Cys Leu Asn
20 25 30Cys Arg His Asn Thr Ala Gly
Arg His Cys His Tyr Cys Lys Glu Gly 35 40
45Tyr Tyr Arg Asp Met Ser Lys Pro Ile Ser His Arg Lys Ala Cys
Lys 50 55 60Ala Cys Asp Cys His Pro
Val Gly Ala Ala Gly Lys Thr Cys Asn Gln65 70
75 80Thr Thr Gly Gln Cys Pro Cys Lys Asp Gly Val
Thr Gly Ile Thr Cys 85 90
95Asn Arg Cys Ala Asn Gly Tyr Gln Gln Ser Arg Ser Pro Ile Ala Pro
100 105 110Cys Ile Lys Ile Pro Ile
Ala Pro Pro 115 12049279DNADanio rerio
49atggtgagag tctctgatgc tttggtcact ttggtgactc tctgctgtgt gctcaaaggg
60actgtcggcg gatatggacc tgcatcgcct gcctcacccg cttctaaagc ctgtgattgc
120catcctgtgg gggccgcggg caaaacctgt aaccaaacca caggccaatg cccctgtaaa
180gacggtgtga cgggtatcac atgcaaccgt tgtgctaacg gctaccagca gagccgatca
240cccattgccc cctgcataaa aattcccatc gctccgcca
2795093PRTDanio rerio 50Met Val Arg Val Ser Asp Ala Leu Val Thr Leu Val
Thr Leu Cys Cys1 5 10
15Val Leu Lys Gly Thr Val Gly Gly Tyr Gly Pro Ala Ser Pro Ala Ser
20 25 30Pro Ala Ser Lys Ala Cys Asp
Cys His Pro Val Gly Ala Ala Gly Lys 35 40
45Thr Cys Asn Gln Thr Thr Gly Gln Cys Pro Cys Lys Asp Gly Val
Thr 50 55 60Gly Ile Thr Cys Asn Arg
Cys Ala Asn Gly Tyr Gln Gln Ser Arg Ser65 70
75 80Pro Ile Ala Pro Cys Ile Lys Ile Pro Ile Ala
Pro Pro 85 905158PRTDanio rerio 51Lys Ala
Cys Asp Cys His Pro Val Gly Ala Ala Gly Lys Thr Cys Asn1 5
10 15Gln Thr Thr Gly Gln Cys Pro Cys
Lys Asp Gly Val Thr Gly Ile Thr 20 25
30Cys Asn Arg Cys Ala Asn Gly Tyr Gln Gln Ser Arg Ser Pro Ile
Ala 35 40 45Pro Cys Ile Lys Ile
Pro Ile Ala Pro Pro 50 5552343PRTMus musculus 52Met
Ala Gly Cys Pro Val Leu Arg Val Pro Thr Leu Phe Leu Ile Leu1
5 10 15Leu Leu Phe Pro Glu Leu His
Thr Ala Gly Thr Leu Ala Ser Gly Ser 20 25
30Ser Ala Arg Asn Leu Pro Glu Thr His Ser His Leu Pro Ser
Ser Ala 35 40 45Leu Trp Val Ser
Gln Ala Ser His His Gly Arg Arg Gly Leu Gly Lys 50 55
60Lys Asp Arg Gly Pro Gly Arg Pro Ser Arg Ala Gln Glu
Gly Ala Val65 70 75
80Val Thr Ala Thr Lys Gln Ala Ser Gln Met Thr Leu Gly Gln Pro Pro
85 90 95Ala Gly Leu Leu Gln Asn
Lys Glu Leu Leu Leu Gly Leu Thr Leu Pro 100
105 110Tyr Pro Glu Lys Glu Ala Arg Ser Pro Ala Trp Glu
Arg Val Lys Lys 115 120 125Arg Gly
Arg Glu His Lys Arg Arg Arg Asp Arg Leu Arg Leu His Arg 130
135 140Gly Arg Ala Ala Ile Arg Gly Pro Ser Ser Leu
Met Lys Lys Val Glu145 150 155
160Pro Ser Glu Asp Arg Met Leu Glu Gly Thr Met Glu Glu Ser Ser Thr
165 170 175Ser Leu Ala Pro
Thr Met Phe Phe Leu Thr Met Thr Asp Gly Ala Thr 180
185 190Pro Thr Thr Glu Glu Ser Arg Ile Leu Pro Val
Thr Ser Leu Arg Pro 195 200 205Gln
Thr Gln Pro Arg Ser Asp Gly Glu Val Met Pro Thr Leu Asp Met 210
215 220Ala Leu Phe Asp Trp Thr Asp Tyr Glu Asp
Leu Lys Pro Glu Val Trp225 230 235
240Pro Ser Ala Lys Lys Lys Glu Lys His Trp Ser His Phe Thr Ser
Asp 245 250 255Gly Asn Glu
Thr Ser Pro Ala Glu Gly Asp Pro Cys Asp His His Gln 260
265 270Asp Cys Leu Pro Gly Thr Cys Cys Asp Leu
Arg Glu His Leu Cys Thr 275 280
285Pro His Asn Arg Gly Leu Asn Asn Lys Cys Phe Asp Asp Cys Met Cys 290
295 300Met Glu Gly Leu Arg Cys Tyr Ala
Lys Phe His Arg Asn Arg Arg Val305 310
315 320Thr Arg Arg Lys Gly Arg Cys Val Glu Pro Glu Thr
Ala Asn Gly Asp 325 330
335Gln Gly Ser Phe Ile Asn Ile 34053349PRTGallus gallus 53Met
Ala Ala Ser Ser Thr Phe Phe Ser Pro Ser Leu Phe Leu Cys Val1
5 10 15Leu Val Leu Ile Asp Ile Thr
Leu Ala Val Ser Leu Asp Thr Asp Met 20 25
30Lys Leu Lys Ser Glu Asn Asn Asn His Leu Gln Asn Gln Glu
Thr Trp 35 40 45Pro Gln Gln Pro
Arg Ser Gly His His His Lys His Gly Leu Ala Lys 50 55
60Lys Gly Arg Val Leu Ala Leu Pro Val Arg Gly Gln Pro
Ala Gly Glu65 70 75
80Glu Ala Leu Arg Val Gly Ser Gly Ala Pro Ala Met Glu Glu Leu Val
85 90 95Pro Leu Gly Gln Pro Ala
Ala Leu Lys Gln Asp Lys Asp Lys Asp Val 100
105 110Phe Leu Gly Phe Glu Leu Pro His Ala Glu Arg Glu
Asn Gln Ser Pro 115 120 125Gly Ser
Glu Arg Gly Lys Lys Gln Asn Arg Glu Gln Arg Arg His Ser 130
135 140Arg Arg Asp Arg Leu Lys His His Arg Gly Lys
Thr Ala Val Gly Pro145 150 155
160Ser Ser Leu Tyr Lys Lys Pro Glu Ser Phe Glu Gln Gln Phe Gln Asn
165 170 175Leu Gln Ala Glu
Glu Ala Thr Ser Pro Thr Pro Thr Val Leu Pro Phe 180
185 190Thr Ala Leu Asp Leu Val Val Ser Thr Glu Glu
Pro Pro Val Leu Pro 195 200 205Ala
Thr Ser Pro Arg Ser Gln Ala Arg Leu Arg Gln Asp Gly Asp Val 210
215 220Met Pro Thr Leu Asp Met Ala Leu Phe Asp
Trp Thr Asp Tyr Glu Asp225 230 235
240Leu Lys Pro Glu Met Trp Pro Ser Ala Lys Lys Lys Glu Lys Arg
Arg 245 250 255Ser Lys Ser
Ser Asn Gly Gly Asn Glu Thr Ser Ser Ala Glu Gly Glu 260
265 270Pro Cys Asp His His Leu Asp Cys Leu Pro
Gly Ser Cys Cys Asp Leu 275 280
285Arg Glu His Leu Cys Lys Pro His Asn Arg Gly Leu Asn Asn Lys Cys 290
295 300Tyr Asp Asp Cys Met Cys Thr Glu
Gly Leu Arg Cys Tyr Ala Lys Phe305 310
315 320His Arg Asn Arg Arg Val Thr Arg Arg Lys Gly Arg
Cys Val Glu Pro 325 330
335Glu Ser Ala Asn Gly Glu Gln Gly Ser Phe Ile Asn Val 340
3455421PRTFelis catus 54Glu Val Met Pro Thr Leu Asp Met Ala
Leu Phe Asp Trp Thr Asp Tyr1 5 10
15Glu Asp Leu Lys Pro 205521PRTRattus norvegicus
55Glu Val Met Pro Thr Leu Asp Met Ala Leu Phe Asp Trp Thr Asp Tyr1
5 10 15Glu Asp Leu Lys Pro
205621PRTMus musculus 56Glu Val Met Pro Thr Leu Asp Met Ala Leu Phe
Asp Trp Thr Asp Tyr1 5 10
15Glu Asp Leu Lys Pro 205721PRTEquus caballus 57Glu Val Met
Pro Thr Leu Asp Met Ala Leu Phe Asp Trp Thr Asp Tyr1 5
10 15Glu Asp Leu Lys Pro
205821PRTBos taurus 58Glu Val Met Pro Thr Leu Asp Met Ala Leu Phe Asp Trp
Thr Asp Tyr1 5 10 15Glu
Asp Leu Lys Pro 205921PRTSus scrofa 59Glu Val Met Pro Thr Leu
Asp Met Ala Leu Phe Asp Trp Thr Asp Tyr1 5
10 15Glu Asp Leu Lys Pro 206021PRTCanis
lupus 60Glu Val Met Pro Thr Leu Asp Met Ala Leu Phe Asp Trp Thr Asp Tyr1
5 10 15Glu Asp Leu Arg
Pro 206121PRTGallus gallus 61Asp Val Met Pro Thr Leu Asp Met
Ala Leu Phe Asp Trp Thr Asp Tyr1 5 10
15Glu Asp Leu Lys Pro 206221PRTTakifugu rubripes
62Glu Val Met Pro Thr Leu Asp Met Thr Leu Phe Asp Trp Thr Asp Tyr1
5 10 15Glu Asp Met Lys Pro
206321PRTXenopus tropicalis 63Asp Val Met Pro Thr Leu Asp Met Thr
Leu Phe Asp Trp Thr Asp Tyr1 5 10
15Glu Asp Met Lys Pro 206448PRTDanio rerio 64Cys Asp
Cys His Pro Val Gly Ala Ala Gly Lys Thr Cys Asn Gln Thr1 5
10 15Thr Gly Gln Cys Pro Cys Lys Asp
Gly Val Thr Gly Ile Thr Cys Asn 20 25
30Arg Cys Ala Asn Gly Tyr Gln Gln Ser Arg Ser Pro Ile Ala Pro
Cys 35 40 456548PRTHomo sapiens
65Cys Asp Cys His Pro Val Gly Ala Ala Gly Lys Thr Cys Asn Gln Thr1
5 10 15Thr Gly Gln Cys Pro Cys
Lys Asp Gly Val Thr Gly Ile Thr Cys Asn 20 25
30Arg Cys Ala Lys Gly Tyr Gln Gln Ser Arg Ser Pro Ile
Ala Pro Cys 35 40 45661029DNAMus
musculus 66atggcagggt gccccgtcct cagggtcccc acgctgttcc tgatcctcct
gctgtttcca 60gagctccaca cggcaggcac ccttgcatct ggatcctctg cccggaacct
gccggagacc 120cactcccacc tccccagctc tgcactgtgg gtgtcccagg caagccatca
tggccgtcgg 180ggcctgggga agaaagacag gggcccagga aggcctagcc gggcccagga
gggggctgtg 240gtcactgcta ccaagcaggc ttcccagatg acactcggac agccccctgc
tggccttctg 300cagaataagg agctgcttct ggggctgact ttgccctacc ccgagaagga
ggcccggtct 360cccgcttggg agagggtgaa gaaacgtggc agagaacaca agagacgcag
ggaccgtctg 420cgactgcacc gaggccgagc tgccatccgt ggccccagct ccctcatgaa
gaaggtggaa 480ccctctgaag accggatgct ggagggtacc atggaggagt cttccactag
cctggccccc 540accatgttct tcctgaccat gacagacggt gccacgccta ctacagaaga
gtcccggatc 600ctgcctgtca cgtccttgcg gccccagaca cagcccaggt ctgacgggga
ggtgatgccc 660acactggaca tggccttatt tgactggacg gattatgaag acttaaagcc
agaggtctgg 720ccttctgcaa agaagaaaga gaaacactgg agtcatttta ccagtgatgg
taacgagacc 780tcgccagctg agggggatcc gtgtgaccat caccaggatt gcttgccagg
aacttgctgt 840gacctccggg aacatctctg cacaccccac aaccgcggcc tcaacaacaa
atgtttcgac 900gactgcatgt gcatggaagg gctgcgttgc tatgccaaat tccaccggaa
ccgcagggtc 960actcggagga aggggcgctg cgtggaaccg gagacagcca acggggacca
gggatctttc 1020atcaacatc
1029671047DNAGallus gallus 67atggcagctt cttccacctt cttctctccg
tctcttttcc tgtgtgtgct ggttcttatt 60gacatcaccc ttgccgtctc cctggacact
gacatgaagc tcaaaagtga gaacaacaac 120caccttcaaa accaagagac gtggcctcag
cagcccagga gtgggcacca ccacaagcat 180ggcttggcca agaaagggag ggtccttgcc
ctgcctgtta gagggcagcc agctggggaa 240gaggccctcc gagtgggcag tggagctcca
gccatggaag agctggtgcc acttggccag 300ccagcagcgc tgaaacagga taaggataag
gatgtgttcc tgggctttga gctcccacac 360gctgagcggg agaatcagtc ccctgggtct
gagaggggaa agaagcagaa ccgagagcag 420cgacggcaca gccgcaggga caggctgaaa
caccacagag ggaagactgc cgttgggcca 480agctccctgt ataagaaacc tgaaagcttc
gagcaacagt ttcaaaacct ccaggcagag 540gaagcaacca gcccgacccc caccgtgctt
cccttcactg cactggatct ggtcgtttcc 600acagaagagc ctcctgttct tccagccacg
tcgccgcggt cacaggcccg cctcaggcaa 660gatggggatg tgatgcccac cctagatatg
gcactctttg actggacaga ttatgaggac 720ctcaaaccag aaatgtggcc gtcagctaaa
aagaaagaga aacgccgcag taagagctcc 780aatggtggaa atgaaacctc atcggcagaa
ggagagccgt gtgaccacca ccttgactgc 840ctcccaggct cttgctgtga cttgcgtgag
cacctctgca aaccacacaa tcgaggcctt 900aacaacaaat gctacgatga ctgtatgtgc
acagaagggc tacgctgtta tgccaaattc 960caccggaacc gaagagtgac ccgaaggaaa
gggcgctgtg tggagcctga gtcggccaat 1020ggagagcagg gatcattcat taatgtt
1047681338DNAArtificial Sequencefusion
protein (zebrafish signal sequence)- (human Netrin1) 68atggtggctc
ctggcttgtg tcaactcttc attctacccg ggctcagcat gttcgcgggc 60caggcggcgc
agcccgatcc ctgctcggac gagaacggcc acccgcgccg ctgcatcccg 120gactttgtca
atgcggcctt cggcaaggac gtgcgcgtgt ccagcacctg cggccggccc 180ccggcgcgct
actgcgtggt gagcgagcgc ggcgaggagc ggctgcgctc gtgccacctc 240tgcaacgcgt
ccgaccccaa gaaggcgcac ccgcccgcct tcctcaccga cctcaacaac 300ccgcacaacc
tgacgtgctg gcagtccgag aactacctgc agttcccgca caacgtcacg 360ctcacactgt
ccctcggcaa gaagttcgaa gtgacctacg tgagcctgca gttctgctcg 420ccgcggcccg
agtccatggc catctacaag tccatggact acgggcgcac gtgggtgccc 480ttccagttct
actccacgca gtgccgcaag atgtacaacc ggccgcaccg cgcgcccatc 540accaagcaga
acgagcagga ggccgtgtgc accgactcgc acaccgacat gcgcccgctc 600tcgggcggcc
tcatcgcctt cagcacgctg gacgggcggc cctcggcgca cgacttcgac 660aactcgcccg
tgctgcagga ctgggtcacg gccacagaca tccgcgtggc cttcagccgc 720ctgcacacgt
tcggcgacga gaacgaggac gactcggagc tggcgcgcga ctcgtacttc 780tacgcggtgt
ccgacctgca ggtgggcggc cggtgcaagt gcaacggcca cgcggcccgc 840tgcgtgcgcg
accgcgacga cagcctggtg tgcgactgca ggcacaacac ggccggcccg 900gagtgcgacc
gctgcaagcc cttccactac gaccggccct ggcagcgcgc cacagcccgc 960gaagccaacg
agtgcgtggc ctgtaactgc aacctgcatg cccggcgctg ccgcttcaac 1020atggagctct
acaagctttc ggggcgcaag agcggaggtg tctgcctcaa ctgtcgccac 1080aacaccgccg
gccgccactg ccattactgc aaggagggct actaccgcga catgggcaag 1140cccatcaccc
accggaaggc ctgcaaagcc tgtgattgcc accctgtggg tgctgctggc 1200aaaacctgca
accaaaccac cggccagtgt ccctgcaagg acggcgtgac gggtatcacc 1260tgcaaccgct
gcgccaaagg ctaccagcag agccgctctc ccatcgcccc ctgcataaag 1320atccctgtag
cgccgccg
133869446PRTArtificial Sequencefusion protein (zebrafish signal
sequence)- (human Netrin1) 69Met Val Ala Pro Gly Leu Cys Gln Leu Phe
Ile Leu Pro Gly Leu Ser1 5 10
15Met Phe Ala Gly Gln Ala Ala Gln Pro Asp Pro Cys Ser Asp Glu Asn
20 25 30Gly His Pro Arg Arg Cys
Ile Pro Asp Phe Val Asn Ala Ala Phe Gly 35 40
45Lys Asp Val Arg Val Ser Ser Thr Cys Gly Arg Pro Pro Ala
Arg Tyr 50 55 60Cys Val Val Ser Glu
Arg Gly Glu Glu Arg Leu Arg Ser Cys His Leu65 70
75 80Cys Asn Ala Ser Asp Pro Lys Lys Ala His
Pro Pro Ala Phe Leu Thr 85 90
95Asp Leu Asn Asn Pro His Asn Leu Thr Cys Trp Gln Ser Glu Asn Tyr
100 105 110Leu Gln Phe Pro His
Asn Val Thr Leu Thr Leu Ser Leu Gly Lys Lys 115
120 125Phe Glu Val Thr Tyr Val Ser Leu Gln Phe Cys Ser
Pro Arg Pro Glu 130 135 140Ser Met Ala
Ile Tyr Lys Ser Met Asp Tyr Gly Arg Thr Trp Val Pro145
150 155 160Phe Gln Phe Tyr Ser Thr Gln
Cys Arg Lys Met Tyr Asn Arg Pro His 165
170 175Arg Ala Pro Ile Thr Lys Gln Asn Glu Gln Glu Ala
Val Cys Thr Asp 180 185 190Ser
His Thr Asp Met Arg Pro Leu Ser Gly Gly Leu Ile Ala Phe Ser 195
200 205Thr Leu Asp Gly Arg Pro Ser Ala His
Asp Phe Asp Asn Ser Pro Val 210 215
220Leu Gln Asp Trp Val Thr Ala Thr Asp Ile Arg Val Ala Phe Ser Arg225
230 235 240Leu His Thr Phe
Gly Asp Glu Asn Glu Asp Asp Ser Glu Leu Ala Arg 245
250 255Asp Ser Tyr Phe Tyr Ala Val Ser Asp Leu
Gln Val Gly Gly Arg Cys 260 265
270Lys Cys Asn Gly His Ala Ala Arg Cys Val Arg Asp Arg Asp Asp Ser
275 280 285Leu Val Cys Asp Cys Arg His
Asn Thr Ala Gly Pro Glu Cys Asp Arg 290 295
300Cys Lys Pro Phe His Tyr Asp Arg Pro Trp Gln Arg Ala Thr Ala
Arg305 310 315 320Glu Ala
Asn Glu Cys Val Ala Cys Asn Cys Asn Leu His Ala Arg Arg
325 330 335Cys Arg Phe Asn Met Glu Leu
Tyr Lys Leu Ser Gly Arg Lys Ser Gly 340 345
350Gly Val Cys Leu Asn Cys Arg His Asn Thr Ala Gly Arg His
Cys His 355 360 365Tyr Cys Lys Glu
Gly Tyr Tyr Arg Asp Met Gly Lys Pro Ile Thr His 370
375 380Arg Lys Ala Cys Lys Ala Cys Asp Cys His Pro Val
Gly Ala Ala Gly385 390 395
400Lys Thr Cys Asn Gln Thr Thr Gly Gln Cys Pro Cys Lys Asp Gly Val
405 410 415Thr Gly Ile Thr Cys
Asn Arg Cys Ala Lys Gly Tyr Gln Gln Ser Arg 420
425 430Ser Pro Ile Ala Pro Cys Ile Lys Ile Pro Val Ala
Pro Pro 435 440 4457026PRTDanio
rerio 70Met Val Ala Pro Gly Leu Cys Gln Leu Phe Ile Leu Leu Leu Ile Thr1
5 10 15Leu Ser His Thr
Leu His Ser Ser Glu Gly 20 257123PRTDanio
rerio 71Met Val Ala Pro Gly Leu Cys Gln Leu Phe Ile Leu Leu Leu Ile Thr1
5 10 15Leu Ser His Thr
Leu His Ser 20721740DNAHomo sapiens 72atgcctggct ggccctgggg
gctgctgctg acggcaggca cgctcttcgc cgccctgagt 60cctgggccgc cggcgcccgc
cgacccctgc cacgatgagg ggggtgcgcc ccgcggctgc 120gtgccaggac tggtgaacgc
cgccctgggc cgcgaggtgc tggcttccag cacgtgcggg 180cggccggcca ctcgggcctg
cgacgcctcc gacccgcgac gggcacactc ccccgccctc 240cttacttccc cagggggcac
ggccagccct ctgtgctggc gctcggagtc cctgcctcgg 300gcgcccctca acgtgactct
cacggtgccc ctgggcaagg cttttgagct ggtcttcgtg 360agcctgcgct tctgctcagc
tcccccagcc tccgtggccc tgctcaagtc tcaggaccat 420ggccgcagct gggccccgct
gggcttcttc tcctcccact gtgacctgga ctatggccgt 480ctgcctgccc ctgccaatgg
cccagctggc ccagggcctg aggccctgtg cttccccgca 540cccctggccc agcctgatgg
cagcggcctt ctggccttca gcatgcagga cagcagcccc 600ccaggcctgg acctggacag
cagcccagtg ctccaagact gggtgaccgc caccgacgtc 660cgtgtagtgc tcacaaggcc
tagcacggca ggtgacccca gggacatgga ggccgtcgtc 720ccttactcct acgcagccac
cgacctccag gtgggcgggc gctgcaagtg caatggacat 780gcctcacggt gcctgctgga
cacacagggc cacctgatct gcgactgtcg gcatggcacc 840gagggccctg actgcggccg
ctgcaagccc ttctactgcg acaggccatg gcagcgggcc 900actgcccggg aatcccacgc
ctgcctcgct tgctcctgca acggccatgc ccgccgctgc 960cgcttcaaca tggagctgta
ccgactgtcc ggccgccgca gcgggggtgt ctgtctcaac 1020tgccggcaca acaccgccgg
ccgccactgc cactactgcc gggagggctt ctatcgagac 1080cctggccgtg ccctgagtga
ccgtcgggct tgcagggcct gcgactgtca cccggttggt 1140gctgctggca agacctgcaa
ccagaccaca ggccagtgtc cctgcaagga tggcgtcact 1200ggcctcacct gcaaccgctg
cgcgcctggc ttccagcaaa gccgctcccc agtggcgccc 1260tgtgttaaga cccctatccc
tggacccact gaggacagca gccctgtgca gccccaggac 1320tgtgactcgc actgcaaacc
tgcccgtggc agctaccgca tcagcctaaa gaagttctgc 1380aagaaggact atgcggtgca
ggtggcggtg ggtgcgcgcg gcgaggcgcg cggcgcgtgg 1440acacgcttcc cggtggcggt
gctcgccgtg ttccggagcg gagaggagcg cgcgcggcgc 1500gggagtagcg cgctgtgggt
gcccgccggg gatgcggcct gcggctgccc gcgcctgctc 1560cccggccgcc gctacctcct
gctggggggc gggcctggag ccgcggctgg gggcgcgggg 1620ggccgggggc ccgggctcat
cgccgcccgc ggaagcctcg tgctaccctg gagggacgcg 1680tggacgcggc gcctgcggag
gctgcagcga cgcgaacggc gggggcgctg cagcgccgcc 174073577PRTHomo sapiens
73Met Ser Met Phe Ala Ala Gln Thr Ser Pro Pro Asp Pro Cys Tyr Asp1
5 10 15Glu Asn Gly His Pro Arg
Arg Cys Ile Pro Asp Phe Val Asn Ala Ala 20 25
30Phe Gly Lys Glu Val Arg Ala Ser Ser Thr Cys Gly Lys
Thr Pro Ser 35 40 45Arg Tyr Cys
Val Val Thr Glu Lys Gly Asp Glu Arg His Arg Asn Cys 50
55 60His Thr Cys Asp Ala Ser Asp Pro Lys Lys Asn His
Pro Pro Ala Tyr65 70 75
80Leu Thr Asp Leu Asn Asn Pro His Asn Leu Thr Cys Trp Gln Ser Asp
85 90 95Asn Tyr Leu Gln Tyr Pro
Gln Asn Val Thr Leu Thr Leu Ser Leu Gly 100
105 110Lys Lys Phe Glu Val Thr Tyr Val Ser Leu Gln Phe
Cys Ser Pro Arg 115 120 125Pro Glu
Ser Met Ala Ile Phe Lys Ser Met Asp Tyr Gly Lys Ser Trp 130
135 140Val Pro Phe Gln Tyr Tyr Ser Thr Gln Cys Arg
Lys Met Tyr Asn Lys145 150 155
160Pro Ser Lys Ala Thr Ile Thr Lys Gln Asn Glu Gln Glu Ala Ile Cys
165 170 175Thr Asp Ser His
Thr Asp Met His Pro Leu Ser Gly Gly Leu Ile Ala 180
185 190Phe Ser Thr Leu Asp Gly Arg Pro Ser Ala His
Asp Phe Asp Asn Ser 195 200 205Pro
Val Leu Gln Asp Trp Val Thr Ala Thr Asp Ile Lys Val Thr Phe 210
215 220Ser Arg Leu His Thr Phe Gly Asp Glu Asn
Glu Asp Asp Ser Glu Leu225 230 235
240Ala Arg Asp Ser Tyr Phe Tyr Ala Val Ser Asp Leu Gln Val Gly
Gly 245 250 255Arg Cys Lys
Cys Asn Gly His Ala Ser Arg Cys Val Lys Asp Arg Asp 260
265 270Gly Asn Leu Val Cys Glu Cys Lys His Asn
Thr Ala Gly Pro Glu Cys 275 280
285Asp Arg Cys Lys Pro Phe His Tyr Asp Arg Pro Trp Gln Arg Ala Thr 290
295 300Ala Arg Glu Ala Asn Glu Cys Val
Ala Cys Asn Cys Asn Leu His Ala305 310
315 320Arg Arg Cys Arg Phe Asn Met Glu Leu Tyr Lys Leu
Ser Gly Arg Lys 325 330
335Ser Gly Gly Val Cys Leu Asn Cys Arg His Asn Thr Ala Gly Arg His
340 345 350Cys His Tyr Cys Lys Glu
Gly Tyr Tyr Arg Asp Met Ser Lys Pro Ile 355 360
365Ser His Arg Lys Ala Cys Lys Ala Cys Asp Cys His Pro Val
Gly Ala 370 375 380Ala Gly Lys Thr Cys
Asn Gln Thr Thr Gly Gln Cys Pro Cys Lys Asp385 390
395 400Gly Val Thr Gly Ile Thr Cys Asn Arg Cys
Ala Asn Gly Tyr Gln Gln 405 410
415Ser Arg Ser Pro Ile Ala Pro Cys Ile Lys Ile Pro Ile Ala Pro Pro
420 425 430Thr Thr Thr Ala Ser
Ser Thr Glu Glu Pro Ser Asp Cys Glu Ser Tyr 435
440 445Cys Lys Ala Ser Lys Gly Lys Leu Lys Ile Asn Met
Lys Lys Tyr Cys 450 455 460Lys Lys Asp
Tyr Ala Val Gln Val His Ile Leu Lys Ala Asp Lys Ala465
470 475 480Gly Glu Trp Trp Lys Phe Thr
Val Asn Ile Ile Ser Val Tyr Lys Gln 485
490 495Gly Glu Ser Arg Ile Arg Arg Gly Asp Gln Phe Leu
Trp Val Arg Ala 500 505 510Lys
Asp Val Ala Cys Lys Cys Pro Lys Ile Lys Ser Gly Lys Lys Tyr 515
520 525Leu Leu Leu Gly Asn Asp Glu Asp Ser
Pro Gly Gln Ser Gly Met Val 530 535
540Ala Asp Lys Gly Ser Leu Val Ile Gln Trp Arg Asp Thr Trp Ala Arg545
550 555 560Arg Leu Arg Lys
Phe Gln Gln Arg Glu Lys Lys Gly Lys Cys Lys Lys 565
570 575Ala74501DNAHomo sapiens 74tgcaagtgca
atggacatgc ctcacggtgc ctgctggaca cacagggcca cctgatctgc 60gactgtcggc
atggcaccga gggccctgac tgcggccgct gcaagccctt ctactgcgac 120aggccatggc
agcgggccac tgcccgggaa tcccacgcct gcctcgcttg ctcctgcaac 180ggccatgccc
gccgctgccg cttcaacatg gagctgtacc gactgtccgg ccgccgcagc 240gggggtgtct
gtctcaactg ccggcacaac accgccggcc gccactgcca ctactgccgg 300gagggcttct
atcgagaccc tggccgtgcc ctgagtgacc gtcgggcttg cagggcctgc 360gactgtcacc
cggttggtgc tgctggcaag acctgcaacc agaccacagg ccagtgtccc 420tgcaaggatg
gcgtcactgg cctcacctgc aaccgctgcg cgcctggctt ccagcaaagc 480cgctccccag
tggcgccctg t 50175167PRTHomo
sapiens 75Cys Lys Cys Asn Gly His Ala Ser Arg Cys Leu Leu Asp Thr Gln
Gly1 5 10 15His Leu Ile
Cys Asp Cys Arg His Gly Thr Glu Gly Pro Asp Cys Gly 20
25 30Arg Cys Lys Pro Phe Tyr Cys Asp Arg Pro
Trp Gln Arg Ala Thr Ala 35 40
45Arg Glu Ser His Ala Cys Leu Ala Cys Ser Cys Asn Gly His Ala Arg 50
55 60Arg Cys Arg Phe Asn Met Glu Leu Tyr
Arg Leu Ser Gly Arg Arg Ser65 70 75
80Gly Gly Val Cys Leu Asn Cys Arg His Asn Thr Ala Gly Arg
His Cys 85 90 95His Tyr
Cys Arg Glu Gly Phe Tyr Arg Asp Pro Gly Arg Ala Leu Ser 100
105 110Asp Arg Arg Ala Cys Arg Ala Cys Asp
Cys His Pro Val Gly Ala Ala 115 120
125Gly Lys Thr Cys Asn Gln Thr Thr Gly Gln Cys Pro Cys Lys Asp Gly
130 135 140Val Thr Gly Leu Thr Cys Asn
Arg Cys Ala Pro Gly Phe Gln Gln Ser145 150
155 160Arg Ser Pro Val Ala Pro Cys
16576144DNAHomo sapiens 76tgcgactgtc acccggttgg tgctgctggc aagacctgca
accagaccac aggccagtgt 60ccctgcaagg atggcgtcac tggcctcacc tgcaaccgct
gcgcgcctgg cttccagcaa 120agccgctccc cagtggcgcc ctgt
1447748PRTHomo sapiens 77Cys Asp Cys His Pro Val
Gly Ala Ala Gly Lys Thr Cys Asn Gln Thr1 5
10 15Thr Gly Gln Cys Pro Cys Lys Asp Gly Val Thr Gly
Leu Thr Cys Asn 20 25 30Arg
Cys Ala Pro Gly Phe Gln Gln Ser Arg Ser Pro Val Ala Pro Cys 35
40 457852PRTHomo sapiens 78Cys Ser Cys His
Pro Val Gly Ser Ala Val Leu Pro Ala Asn Ser Val1 5
10 15Thr Phe Cys Asp Pro Ser Asn Gly Asp Cys
Pro Cys Lys Pro Gly Val 20 25
30Ala Gly Arg Arg Cys Asp Arg Cys Met Val Gly Tyr Trp Gly Phe Gly
35 40 45Asp Tyr Gly Cys
507948PRTDanio rerio 79Cys Asp Cys His Pro Val Gly Ala Ala Gly Lys Thr
Cys Asn Gln Thr1 5 10
15Thr Gly Gln Cys Pro Cys Lys Asp Gly Val Thr Gly Ile Thr Cys Asn
20 25 30Arg Cys Ala Lys Gly Tyr Gln
Gln Ser Arg Ser Pro Ile Ala Pro Cys 35 40
458025DNAArtificial Sequencentn1a morpholino 80atgatggact
taccgacaca ttcgt
258125DNAArtificial Sequencentn1b morpholino 81cgcacgttac caaaatcctt
atcat 25825PRTArtificial
Sequencepeptide linker 82Ser Gly Gly Gly Gly1 5
* * * * *